RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 OR10A3P58181 314 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 HNRNPA0Q13151 305 aaKnown RBP9.51□□□□□ -0.89
VPS11-208ENST00000621676 CBFBQ13951 182 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 SGCBQ16585 318 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 ZMAT1Q5H9K5 638 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 C12orf73Q69YU5 71 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 MRPL14Q6P1L8 145 aaKnown RBP9.51□□□□□ -0.89
VPS11-208ENST00000621676 KMT5CQ86Y97 462 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 SERPINA12Q8IW75 414 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 IZUMO1Q8IYV9 350 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 ALDH16A1Q8IZ83 802 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 SUMF1Q8NBK3 374 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 PLPP5Q8NEB5 264 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 SPACA9Q96E40 222 aaPredicted RBP9.51□□□□□ -0.89
VPS11-208ENST00000621676 AMELYQ99218 206 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 C8orf4Q9NR00 106 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 MED17Q9NVC6 651 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 DKKL1Q9UK85 242 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 SLC35A3Q9Y2D2 325 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 NPIPB9F8W1W9 429 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 BHLHE40O14503 412 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 LYPD3O95274 346 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 RAB36O95755 333 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 TFP02787 698 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 COX6A1P12074 109 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 CCNOP22674 350 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 GDF1P27539 372 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 HOXA6P31267 233 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 RBMXP38159 391 aaKnown RBP9.51□□□□□ -0.89
VPS11-208ENST00000621676 BIDP55957 195 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 ZNF74Q16587 644 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 IRAK1BP1Q5VVH5 260 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 ZNF385CQ66K41 422 aaPredicted RBP9.51□□□□□ -0.89
VPS11-208ENST00000621676 ZNF613Q6PF04 617 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 OR8H2Q8N162 312 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 ACBD7Q8N6N7 88 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 DNAAF1Q8NEP3 725 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 OR7G1Q8NGA0 311 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 OR5L2Q8NGL0 311 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 DNAJA4Q8WW22 397 aaPredicted RBP9.51□□□□□ -0.89
VPS11-208ENST00000621676 GCDHQ92947 438 aaPredicted RBP9.51□□□□□ -0.89
VPS11-208ENST00000621676 FKBP10Q96AY3 582 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 ZNF764Q96H86 408 aaPredicted RBP9.51□□□□□ -0.89
VPS11-208ENST00000621676 SIGLEC12Q96PQ1 595 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 KCNG2Q9UJ96 466 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 COA3Q9Y2R0 106 aaPredicted RBP9.51□□□□□ -0.89
VPS11-208ENST00000621676 VSTM2BA6NLU5 285 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 WNT11O96014 354 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 WT1P19544 449 aaPredicted RBP9.51□□□□□ -0.89
VPS11-208ENST00000621676 P2RX1P51575 399 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 MC2RQ01718 297 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 MYBPHQ13203 477 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 LSAMPQ13449 338 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 IL18R1Q13478 541 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 INAQ16352 499 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 ASCL5Q7RTU5 278 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 ATG4DQ86TL0 474 aaPredicted RBP9.51□□□□□ -0.89
VPS11-208ENST00000621676 ZNF845Q96IR2 970 aaPredicted RBP9.51□□□□□ -0.89
VPS11-208ENST00000621676 PPIL3Q9H2H8 161 aaKnown RBP9.51□□□□□ -0.89
VPS11-208ENST00000621676 EMC7Q9NPA0 242 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 QPCTLQ9NXS2 382 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 IGHV1-45A0A0A0MS14 117 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 PINLYPA6NC86 204 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 SULT2B1O00204 365 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 ZNF806P0C7X5 589 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 PTHLHP12272 177 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 RPS4Y1P22090 263 aaKnown RBP9.5□□□□□ -0.89
VPS11-208ENST00000621676 RAB25P57735 213 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 PRKCDQ05655 676 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 KRR1Q13601 381 aaKnown RBP9.5□□□□□ -0.89
VPS11-208ENST00000621676 SGCAQ16586 387 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 ACER2Q5QJU3 275 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 ZNF248Q8NDW4 579 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 ALG12Q9BV10 488 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 KLHDC2Q9Y2U9 406 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 ZNF337Q9Y3M9 751 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 ALG1L2C9J202 215 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 CCRL2O00421 344 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 GALR2O43603 387 aaPredicted RBP9.5□□□□□ -0.89
VPS11-208ENST00000621676 CTLA4P16410 223 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 EDNRAP25101 427 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 SSR4P51571 173 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 FABP5Q01469 135 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 PLGLB1Q02325 96 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 DEFB109BQ30KR1 87 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 IDNKQ5T6J7 187 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 DDI2Q5TDH0 399 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 SLC22A10Q63ZE4 541 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 MEPCEQ7L2J0 689 aaKnown RBP9.5□□□□□ -0.89
VPS11-208ENST00000621676 SLC46A3Q7Z3Q1 461 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 PPP1R32Q7Z5V6 425 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 PHC2Q8IXK0 858 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 GALNT15Q8N3T1 639 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 YIPF7Q8N8F6 280 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 WDSUB1Q8N9V3 476 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 PRSS33Q8NF86 280 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 OR10AC1Q8NH08 325 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 RAB2BQ8WUD1 216 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 SPACA5Q96QH8 159 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 PELOQ9BRX2 385 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms