RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 ZNF587BE7ETH6 402 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 LRRN3E7EW58 273 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 M0R082 166 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 TRAF3IP2O43734 574 aaPredicted RBP9.93□□□□□ -0.82
CPNE3-210ENST00000621245 TPST2O60704 377 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 AHSA1O95433 338 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 IGLV1-44P01699 117 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 ARAFP10398 606 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 HLA-DOBP13765 273 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 GRPRP30550 384 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 MAP2K6P52564 334 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 EFNA4P52798 201 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 COPZ1P61923 177 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 ARF1P84077 181 aaKnown RBP9.93□□□□□ -0.82
CPNE3-210ENST00000621245 ROR2Q01974 943 aaKnown RBP9.93□□□□□ -0.82
CPNE3-210ENST00000621245 NAAAQ02083 359 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 TGFBR3Q03167 851 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 HGFACQ04756 655 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 ADIPOQQ15848 244 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 MSMPQ1L6U9 139 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 BEND6Q5SZJ8 279 aaPredicted RBP9.93□□□□□ -0.82
CPNE3-210ENST00000621245 KLHL24Q6TFL4 600 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 C6orf89Q6UWU4 347 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 TMEM123Q8N131 208 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 ZCCHC24Q8N2G6 241 aaKnown RBP9.93□□□□□ -0.82
CPNE3-210ENST00000621245 MFSD8Q8NHS3 518 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 ZNF417Q8TAU3 575 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 STK35Q8TDR2 534 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 ZNF587Q96SQ5 575 aaPredicted RBP9.93□□□□□ -0.82
CPNE3-210ENST00000621245 PIF1Q9H611 641 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 RMND5AQ9H871 391 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 FKRPQ9H9S5 495 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 BCL2L10Q9HD36 194 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 CA10Q9NS85 328 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 CALML5Q9NZT1 146 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 VAPAQ9P0L0 249 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 KLHL14Q9P2G3 628 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 ARPC4-TTLL3A0A0A6YYG9 625 aa9.92□□□□□ -0.82
CPNE3-210ENST00000621245 RNF212BA8MTL3 300 aa9.92□□□□□ -0.82
CPNE3-210ENST00000621245 SLCO1B7G3V0H7 640 aa9.92□□□□□ -0.82
CPNE3-210ENST00000621245 PHF1O43189 567 aaPredicted RBP9.92□□□□□ -0.82
CPNE3-210ENST00000621245 KRT33AO76009 404 aa9.92□□□□□ -0.82
CPNE3-210ENST00000621245 WNT11O96014 354 aa9.92□□□□□ -0.82
CPNE3-210ENST00000621245 OR4A8P0C604 315 aa9.92□□□□□ -0.82
CPNE3-210ENST00000621245 SLC25A16P16260 332 aa9.92□□□□□ -0.82
CPNE3-210ENST00000621245 IGFBP5P24593 272 aa9.92□□□□□ -0.82
CPNE3-210ENST00000621245 AQP1P29972 269 aa9.92□□□□□ -0.82
CPNE3-210ENST00000621245 SLC18A1P54219 525 aa9.92□□□□□ -0.82
CPNE3-210ENST00000621245 GGTLC2Q14390 218 aa9.92□□□□□ -0.82
CPNE3-210ENST00000621245 CHRFAM7AQ494W8 412 aa9.92□□□□□ -0.82
CPNE3-210ENST00000621245 LRIF1Q5T3J3 769 aa9.92□□□□□ -0.82
CPNE3-210ENST00000621245 ANKRD16Q6P6B7 361 aa9.92□□□□□ -0.82
CPNE3-210ENST00000621245 SPATA3Q8NHX4 192 aa9.92□□□□□ -0.82
CPNE3-210ENST00000621245 BBS10Q8TAM1 723 aa9.92□□□□□ -0.82
CPNE3-210ENST00000621245 LINC00470Q9BZP3 86 aa9.92□□□□□ -0.82
CPNE3-210ENST00000621245 GPR35Q9HC97 309 aa9.92□□□□□ -0.82
CPNE3-210ENST00000621245 TMEM45AQ9NWC5 275 aa9.92□□□□□ -0.82
CPNE3-210ENST00000621245 NKIRAS1Q9NYS0 192 aa9.92□□□□□ -0.82
CPNE3-210ENST00000621245 RASD1Q9Y272 281 aa9.92□□□□□ -0.82
CPNE3-210ENST00000621245 MS4A18H0YCH9 400 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 ST8SIA5O15466 376 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 IGKV3-15P01624 115 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 PRKAR1BP31321 381 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 IL2RGP31785 369 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 THBS4P35443 961 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 MRPL19P49406 292 aaKnown RBP9.91□□□□□ -0.82
CPNE3-210ENST00000621245 IDH3GP51553 393 aaPredicted RBP9.91□□□□□ -0.82
CPNE3-210ENST00000621245 DSCR9P59020 149 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 SELPLGQ14242 412 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 ADRM1Q16186 407 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 CARTPTQ16568 116 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 CEACAM16Q2WEN9 425 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 MS4A18Q3C1V0 323 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 GCNT6Q5T4J0 391 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 CARD17Q5XLA6 110 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 NHLRC1Q6VVB1 395 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 MDP1Q86V88 176 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 TSPYL5Q86VY4 417 aaPredicted RBP9.91□□□□□ -0.82
CPNE3-210ENST00000621245 GOLGA6L1Q8N7Z2 621 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 SPDL1Q96EA4 605 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 FOXN4Q96NZ1 517 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 MOGAT1Q96PD6 335 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 OR2M2Q96R28 347 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 VRK1Q99986 396 aaPredicted RBP9.91□□□□□ -0.82
CPNE3-210ENST00000621245 CPPED1Q9BRF8 314 aaPredicted RBP9.91□□□□□ -0.82
CPNE3-210ENST00000621245 EMC6Q9BV81 110 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 KATNB1Q9BVA0 655 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 CHODLQ9H9P2 273 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 TCF7L2Q9NQB0 619 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 CCDC167Q9P0B6 97 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 IFT52Q9Y366 437 aa9.91□□□□□ -0.82
CPNE3-210ENST00000621245 IGHV2OR16-5A0A0B4J2B6 119 aa9.9□□□□□ -0.82
CPNE3-210ENST00000621245 TMEM129A0AVI4 362 aa9.9□□□□□ -0.82
CPNE3-210ENST00000621245 VAMP5O95183 116 aa9.9□□□□□ -0.82
CPNE3-210ENST00000621245 BGLAPP02818 100 aa9.9□□□□□ -0.82
CPNE3-210ENST00000621245 FAM157CP0CG43 387 aa9.9□□□□□ -0.82
CPNE3-210ENST00000621245 ZNF43P17038 809 aa9.9□□□□□ -0.82
CPNE3-210ENST00000621245 USF1P22415 310 aaPredicted RBP9.9□□□□□ -0.82
CPNE3-210ENST00000621245 SERPINF1P36955 418 aa9.9□□□□□ -0.82
CPNE3-210ENST00000621245 NR4A2P43354 598 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms