RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 PPP4R1LQ9P1A2 415 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 DAPK2Q9UIK4 370 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 PCDHGB6Q9Y5F9 930 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 SHISA8B8ZZ34 492 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 CASKO14936 926 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 RGS9O75916 674 aaPredicted RBP15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 AHSA1O95433 338 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 PLGP00747 810 aaPredicted RBP15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 AHCYP23526 432 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 SUMO3P55854 103 aaPredicted RBP15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 EMC4Q5J8M3 183 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 LAX1Q8IWV1 398 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 OR2Y1Q8NGV0 311 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 STK35Q8TDR2 534 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 ABTB1Q969K4 478 aaPredicted RBP15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 ZNF700Q9H0M5 742 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 ABCB10Q9NRK6 738 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 LOXL2Q9Y4K0 774 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 PCDHGB7Q9Y5F8 929 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 IQCMA0A1B0GVH7 501 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 TBX1O43435 398 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 PLPP2O43688 288 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 DKK1O94907 266 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 ACVR1BP36896 505 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 ETV6P41212 452 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 FOXF1Q12946 379 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 NTRK2Q16620 822 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 SPANXN2Q5MJ10 180 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 SLC6A19Q695T7 634 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 GPR139Q6DWJ6 353 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 SPACA9Q96E40 222 aaPredicted RBP15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 IMMP1LQ96LU5 166 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 AKAP7Q9P0M2 348 aaPredicted RBP15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 NCDNQ9UBB6 729 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 UPK1BO75841 260 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 IL11P20809 199 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 GTF2E2P29084 291 aaKnown RBP15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 PSMD7P51665 324 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 TAS2R43P59537 309 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 SF3A2Q15428 464 aaKnown RBP15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 INPP5JQ15735 1006 aaPredicted RBP15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 DCAF12Q5T6F0 453 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 FAM83FQ8NEG4 500 aaPredicted RBP15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 ZNF417Q8TAU3 575 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 SNX33Q8WV41 574 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 ASB15Q8WXK1 588 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 PELI1Q96FA3 418 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 COX4I2Q96KJ9 171 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 ZNF587Q96SQ5 575 aaPredicted RBP15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 INIPQ9NRY2 104 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 POLHQ9Y253 713 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 WIF1Q9Y5W5 379 aa15.67■□□□□ 0.1
PCDHGC3-205ENST00000617641 ARHGEF9O43307 516 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 ITGA10O75578 1167 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 NCR1O76036 304 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 STK17BO94768 372 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 OCM2P0CE71 109 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 OCMP0CE72 109 aaPredicted RBP15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 CD59P13987 128 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 ACTA2P62736 377 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 ACTG2P63267 376 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 CDONQ4KMG0 1287 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 ARL5BQ96KC2 179 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 SLC30A2Q9BRI3 323 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 WDR70Q9NW82 654 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 ST6GALNAC2Q9UJ37 374 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 GNG8Q9UK08 70 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 MASP2O00187 686 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 CDX4O14627 284 aaPredicted RBP15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 DXOO77932 396 aaKnown RBP15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 RENP00797 406 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 GALP22466 123 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 TCEA1P23193 301 aaKnown RBP15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 DMKNQ6E0U4 476 aaPredicted RBP15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 PM20D2Q8IYS1 436 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 OR6V1Q8N148 313 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 SYS1Q8N2H4 156 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 PGLYRP3Q96LB9 341 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 MROQ9BYG7 248 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 SYT4Q9H2B2 425 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 POLE4Q9NR33 117 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 CMAHPQ9Y471 501 aa15.66■□□□□ 0.1
PCDHGC3-205ENST00000617641 SLC35F4A4IF30 521 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 FTCDNL1E5RQL4 147 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 PLPP3O14495 311 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 APOBEC1P41238 236 aaKnown RBP15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 FOLR3P41439 243 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 CASP3P42574 277 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 EXT1Q16394 746 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 ACKR1Q16570 336 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 TRIM16LQ309B1 348 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 FAM27D1Q5T7N8 215 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 OR11G2Q8NGC1 345 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 THAP4Q8WY91 577 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 PPIL3Q9H2H8 161 aaKnown RBP15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 ABCB9Q9NP78 766 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 ACOXLQ9NUZ1 547 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 MOKQ9UQ07 419 aa15.65■□□□□ 0.1
PCDHGC3-205ENST00000617641 TVP23AA6NH52 213 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms