RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 SBK2P0C263 348 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 CD8BP10966 210 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 PSMA1P25786 263 aaKnown RBP7.04□□□□□ -1.28
NEK3-207ENST00000617054 TSPAN7P41732 249 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 POLR2HP52434 150 aaKnown RBP7.04□□□□□ -1.28
NEK3-207ENST00000617054 E2F1Q01094 437 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 EFR3AQ14156 821 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 TP53I3Q53FA7 332 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 MESTQ5EB52 335 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 ATP1A1-AS1Q5TC04 95 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 ARHGAP11AQ6P4F7 1023 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 PPP1R32Q7Z5V6 425 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 PM20D2Q8IYS1 436 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 TMEM156Q8N614 296 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 ACBD7Q8N6N7 88 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 C4orf36Q96KX1 117 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 TAAR9Q96RI9 348 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 TMEM43Q9BTV4 400 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 SYT4Q9H2B2 425 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 QPCTLQ9NXS2 382 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 IL17BQ9UHF5 180 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 FARSAQ9Y285 508 aaKnown RBP7.04□□□□□ -1.28
NEK3-207ENST00000617054 EXOGQ9Y2C4 368 aaKnown RBP7.04□□□□□ -1.28
NEK3-207ENST00000617054 LOC102723996A0A087X1L8 192 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 SPI1P17947 270 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 SHC1P29353 583 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 IDUAP35475 653 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 DLSTP36957 453 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 CENPAP49450 140 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 PRPS1P60891 318 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 FABP5Q01469 135 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 FAM27D1Q5T7N8 215 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 ZNF322Q6U7Q0 402 aaPredicted RBP7.03□□□□□ -1.28
NEK3-207ENST00000617054 FAM122BQ7Z309 247 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 GRINAQ7Z429 371 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 GID4Q8IVV7 300 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 OR6V1Q8N148 313 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 LRRC75AQ8NAA5 344 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 ZNF485Q8NCK3 441 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 ZNF700Q9H0M5 742 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 NXT1Q9UKK6 140 aaKnown RBP7.03□□□□□ -1.28
NEK3-207ENST00000617054 COPS3Q9UNS2 423 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 HIF3AQ9Y2N7 669 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 WIF1Q9Y5W5 379 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 PHF3Q92576 2039 aaKnown RBP7.03□□□□□ -1.28
NEK3-207ENST00000617054 A0A0G2JMM0 328 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 LOC101059948A0A1B0GTJ6 334 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 A0A1W2PPB8 328 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 A0A1W2PRS3 328 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 KIR3DP1A8MWS1 328 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 NCR1O76036 304 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 AKR7A3O95154 331 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 IFNGP01579 166 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 CD14P08571 375 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 UQCRC1P31930 480 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 PSMB10P40306 273 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 MAGEB1P43366 347 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 ZNF85Q03923 595 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 SLC3A1Q07837 685 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 TCF15Q12870 199 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 MLLT11Q13015 90 aaPredicted RBP7.03□□□□□ -1.28
NEK3-207ENST00000617054 NTRK2Q16620 822 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 NDUFAF7Q7L592 441 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 RPS19BP1Q86WX3 136 aaKnown RBP7.03□□□□□ -1.28
NEK3-207ENST00000617054 KLHL36Q8N4N3 616 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 OR13C5Q8NGS8 318 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 OR5J2Q8NH18 312 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 MCFD2Q8NI22 146 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 SLC22A8Q8TCC7 542 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 ASB15Q8WXK1 588 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 HTRA1Q92743 480 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 LRFN5Q96NI6 719 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 EMC6Q9BV81 110 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 CDADC1Q9BWV3 514 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 ASPNQ9BXN1 380 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 SLC19A3Q9BZV2 496 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 TXNL4BQ9NX01 149 aaKnown RBP7.03□□□□□ -1.28
NEK3-207ENST00000617054 TRAV36DV7A0A075B6V5 113 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 SLC22A31A6NKX4 558 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 A8MVM7 634 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 PRR32B1ATL7 298 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 H0YC42 278 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 CTDSP2O14595 271 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 CDRT1O95170 752 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 IGHA1P01876 353 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 RFC3P40938 356 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 LIMK1P53667 647 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 PON3Q15166 354 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 ACKR1Q16570 336 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 CLPPQ16740 277 aaPredicted RBP7.03□□□□□ -1.28
NEK3-207ENST00000617054 DGUOKQ16854 277 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 FAM69AQ5T7M9 428 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 VASNQ6EMK4 673 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 C19orf48Q6RUI8 117 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 NUP54Q7Z3B4 507 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 PSD4Q8NDX1 1056 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 POC1BQ8TC44 478 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 DDOQ99489 341 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 BARHL1Q9BZE3 327 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 NUAK2Q9H093 628 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms