RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 AKR7A3O95154 331 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 ZFPL1O95159 310 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 BAMBIQ13145 260 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 RAB33AQ14088 237 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 PON3Q15166 354 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 KCTD9Q7L273 389 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 PXKQ7Z7A4 578 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 GLB1L2Q8IW92 636 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 OR5M9Q8NGP3 310 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 OR10AC1Q8NH08 325 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 Q96M85 177 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 PRSS27Q9BQR3 290 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 SPHK2Q9NRA0 654 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 ZNF275Q9NSD4 429 aaPredicted RBP12.08□□□□□ -0.48
MSH6-214ENST00000616033 SPHK1Q9NYA1 384 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 CHD7Q9P2D1 2997 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 IGKV1-8A0A0C4DH67 115 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 TMEM72A0PK05 275 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 KLK3P07288 261 aaPredicted RBP12.08□□□□□ -0.48
MSH6-214ENST00000616033 CCL5P13501 91 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 CPMP14384 443 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 HOXA1P49639 335 aaPredicted RBP12.08□□□□□ -0.48
MSH6-214ENST00000616033 CCR4P51679 360 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 NANOS3P60323 173 aaKnown RBP12.08□□□□□ -0.48
MSH6-214ENST00000616033 SHC2P98077 582 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 RBM39Q14498 530 aaKnown RBP12.08□□□□□ -0.48
MSH6-214ENST00000616033 C5orf46Q6UWT4 87 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 OR4E2Q8NGC2 313 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 INTS12Q96CB8 462 aaKnown RBP12.08□□□□□ -0.48
MSH6-214ENST00000616033 CNN2Q99439 309 aaKnown RBP12.08□□□□□ -0.48
MSH6-214ENST00000616033 PBX4Q9BYU1 374 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 WDR13Q9H1Z4 485 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 EXOSC3Q9NQT5 275 aaKnown RBP12.08□□□□□ -0.48
MSH6-214ENST00000616033 KLF15Q9UIH9 416 aa12.08□□□□□ -0.48
MSH6-214ENST00000616033 KANTRA0A1W2PQU2 76 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 J3QRE1 110 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 FADS1O60427 444 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 GPANK1O95872 356 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 PAK4O96013 591 aaPredicted RBP12.07□□□□□ -0.48
MSH6-214ENST00000616033 RPN2P04844 631 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 ACAA1P09110 424 aaPredicted RBP12.07□□□□□ -0.48
MSH6-214ENST00000616033 AQP2P41181 271 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 EFNB2P52799 333 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 BLOC1S1P78537 153 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 MAT1AQ00266 395 aaKnown RBP12.07□□□□□ -0.48
MSH6-214ENST00000616033 ZNF234Q14588 700 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 LRRTM1Q86UE6 522 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 SFT2D1Q8WV19 159 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 NSMAFQ92636 917 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 ARRDC3Q96B67 414 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 MS4A6EQ96DS6 147 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 GFI1Q99684 422 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 PELOQ9BRX2 385 aaKnown RBP12.07□□□□□ -0.48
MSH6-214ENST00000616033 RSRP1Q9BUV0 290 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 BIN3Q9NQY0 253 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 GLS2Q9UI32 602 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 FOXJ3Q9UPW0 622 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 SIGLEC7Q9Y286 467 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 NPTNQ9Y639 398 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 C13orf42A0A1B0GVH6 325 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 IGLON5A6NGN9 336 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 EEF1E1-BLOC1S5C9J1V9 151 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 ADAM11O75078 769 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 CSF2RAP15509 400 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 MST1P26927 711 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 NDUFS1P28331 727 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 GABRA3P34903 492 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 LTBQ06643 244 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 HACD4Q5VWC8 232 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 RHOUQ7L0Q8 258 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 ZAR1Q86SH2 424 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 CD163Q86VB7 1156 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 OR1S2Q8NGQ3 325 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 PHOSPHO1Q8TCT1 267 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 INSM2Q96T92 566 aaPredicted RBP12.07□□□□□ -0.48
MSH6-214ENST00000616033 MTHFD2LQ9H903 347 aaPredicted RBP12.07□□□□□ -0.48
MSH6-214ENST00000616033 CARNS1A5YM72 827 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 OR2AT4A6NND4 320 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 LATS1O95835 1130 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 IFNGP01579 166 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 DDX6P26196 483 aaKnown RBP eCLIP12.07□□□□□ -0.48
MSH6-214ENST00000616033 PGDP52209 483 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 ZNF136P52737 540 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 BDH1Q02338 343 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 ZNF676Q8N7Q3 588 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 OR51A4Q8NGJ6 313 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 TMEM27Q9HBJ8 222 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 COA4Q9NYJ1 87 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 APOBEC3BQ9UH17 382 aaKnown RBP12.07□□□□□ -0.48
MSH6-214ENST00000616033 SLC6A5Q9Y345 797 aa12.07□□□□□ -0.48
MSH6-214ENST00000616033 GXYLT2A0PJZ3 443 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 MCIDASD6RGH6 385 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 SYT5O00445 386 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 REEP5Q00765 189 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 SMCO1Q147U7 214 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 TRAM1Q15629 374 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 PWWP2BQ6NUJ5 590 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 ABHD17CQ6PCB6 329 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 OR5K2Q8NHB8 316 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 THAP6Q8TBB0 222 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms