RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 OR10A5Q9H207 317 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 OR10A2Q9H208 303 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 CHST2Q9Y4C5 530 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 LOC100289279A0A1B0GTE1 492 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 CCSO14618 274 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 OR2F2O95006 317 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 CFIP05156 583 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 TPOP07202 933 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 SBK3P0C264 359 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 SFTPDP35247 375 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 PFN3P60673 137 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 OR2F1Q13607 317 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 SNTB1Q13884 538 aaKnown RBP17.47■□□□□ 0.39
SPAST-203ENST00000615843 ZNF852Q6ZMS4 543 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 KCNRGQ8N5I3 272 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 AMDHD1Q96NU7 426 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 ADOQ96SZ5 270 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 CMSS1Q9BQ75 279 aaKnown RBP17.47■□□□□ 0.39
SPAST-203ENST00000615843 GPR174Q9BXC1 333 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 SELENOIQ9C0D9 397 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 SLIRPQ9GZT3 109 aaKnown RBP17.47■□□□□ 0.39
SPAST-203ENST00000615843 RNF32Q9H0A6 362 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 WDR76Q9H967 626 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 PLEK2Q9NYT0 353 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 KLF15Q9UIH9 416 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 SCN11AQ9UI33 1791 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 TAGLN2P37802 199 aaKnown RBP17.47■□□□□ 0.39
SPAST-203ENST00000615843 IAH1Q2TAA2 248 aaPredicted RBP17.47■□□□□ 0.39
SPAST-203ENST00000615843 OLIG3Q7RTU3 272 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 CCDC190Q86UF4 302 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 TCEAL8Q8IYN2 117 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 RAB39BQ96DA2 213 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 OR11A1Q9GZK7 315 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 STARD5Q9NSY2 213 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 C17orf113A0A1B0GUU1 675 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 TMEM189-UBE2V1I3L0A0 370 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 CNMDO75829 334 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 HOXD11P31277 338 aaPredicted RBP17.46■□□□□ 0.39
SPAST-203ENST00000615843 OR5B2Q96R09 309 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 MS4A8Q9BY19 250 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 A0A1W2PPV4 95 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 TUBAL3A6NHL2 446 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 NUDT19A8MXV4 375 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 IMPA2O14732 288 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 VIPR2P41587 438 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 RAD52P43351 418 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 USP51Q70EK9 711 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 HSD17B11Q8NBQ5 300 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 MR1Q95460 341 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 ZMAT3Q9HA38 289 aaKnown RBP17.46■□□□□ 0.39
SPAST-203ENST00000615843 NSA2O95478 260 aaKnown RBP17.46■□□□□ 0.39
SPAST-203ENST00000615843 KIR2DL3P43628 341 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 SLC6A11P48066 632 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 DHPSP49366 369 aaPredicted RBP17.46■□□□□ 0.39
SPAST-203ENST00000615843 EFNA3P52797 238 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 FAHD1Q6P587 224 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 ZNF705AQ6ZN79 300 aaPredicted RBP17.46■□□□□ 0.39
SPAST-203ENST00000615843 TEX19Q8NA77 164 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 C20orf24Q9BUV8 137 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 PRSS16Q9NQE7 514 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 UBQLN4Q9NRR5 601 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 SCML1Q9UN30 329 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 TCRBV21S2A2A0A5A6 115 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 FTCDNL1E5RQL4 147 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 YY2O15391 372 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 TXNDC12O95881 172 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 MMP2P08253 660 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 APEHP13798 732 aaKnown RBP17.46■□□□□ 0.39
SPAST-203ENST00000615843 ZNF44P15621 663 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 ACSM5Q6NUN0 579 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 TEX261Q6UWH6 196 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 PDCD1LG2Q9BQ51 273 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 MUTYHQ9UIF7 546 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 FBXL4Q9UKA2 621 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 U3KQ87 197 aa17.46■□□□□ 0.39
SPAST-203ENST00000615843 A0A0J9YY10 115 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 OTOL1A6NHN0 477 aaPredicted RBP17.45■□□□□ 0.38
SPAST-203ENST00000615843 SSTP61278 116 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 HSF5Q4G112 596 aaPredicted RBP17.45■□□□□ 0.38
SPAST-203ENST00000615843 HTR3DQ70Z44 454 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 GRAMD2AQ8IUY3 354 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 RSPRY1Q96DX4 576 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 ISYNA1Q9NPH2 558 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 GABRQQ9UN88 632 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 TP53TG5Q9Y2B4 290 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 DUX1O43812 170 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 LGI1O95970 557 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 NAGAP17050 411 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 MLC1Q15049 377 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 XAF1Q6GPH4 301 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 RFLNAQ6ZTI6 216 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 OR6M1Q8NGM8 313 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 ZNF286AQ9HBT8 521 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 LGALS8O00214 317 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 B3GALT4O96024 378 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 FABP5Q01469 135 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 ZNF74Q16587 644 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 OR5K2Q8NHB8 316 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 CPNE4Q96A23 557 aaPredicted RBP17.45■□□□□ 0.38
SPAST-203ENST00000615843 S100A8P05109 93 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms