RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 POLDIP2Q9Y2S7 368 aa2.22□□□□□ -2.05
HMGB1P24-202ENST00000615653 MEMO1Q9Y316 297 aa2.22□□□□□ -2.05
HMGB1P24-202ENST00000615653 PYGO1Q9Y3Y4 419 aa2.22□□□□□ -2.05
HMGB1P24-202ENST00000615653 POLR3HQ9Y535 204 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P24-202ENST00000615653 V9GYY9 64 aa2.22□□□□□ -2.05
HMGB1P24-202ENST00000615653 IGLV7-46A0A075B6I9 117 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 A0A1W2PPE3 182 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 SH3PXD2BA1X283 911 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 BCLAF3A2AJT9 711 aaKnown RBP2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 PP2D1A8MPX8 630 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 TMEM114B3SHH9 223 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 SMLR1H3BR10 107 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 H7C0C1 242 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 SH2D1BO14796 132 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 MSH4O15457 936 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 CIAO1O76071 339 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 NXPH2O95156 264 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 PSMG1O95456 288 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 HPRP00739 348 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 NGFP01138 241 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 FGGP02679 453 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 IFNW1P05000 195 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 RHOCP08134 193 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 FRMD6-AS1P0C7T7 363 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 CALM1P0DP23 149 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 CALM2P0DP24 149 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 CALM3P0DP25 149 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 NR2C1P13056 603 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 NQO1P15559 274 aaKnown RBP2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 KITLGP21583 273 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 CA6P23280 308 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 FOXN2P32314 431 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 CSKP41240 450 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 MAGEA3P43357 314 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 MAGEA6P43360 314 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 RANBP1P43487 201 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 KIR3DL2P43630 455 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 SLCO1A2P46721 670 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 GNG10P50151 68 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 CCR8P51685 355 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 HSPA2P54652 639 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 MLF1P58340 268 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 GPX6P59796 221 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 UBE2KP61086 200 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 EWSR1Q01844 656 aaKnown RBP eCLIP2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 NAAAQ02083 359 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 SP3Q02447 781 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 PAX2Q02962 417 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 CKAP4Q07065 602 aaKnown RBP2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 CYP24A1Q07973 514 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 ZNF415Q09FC8 603 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 PNRC1Q12796 327 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 ZP4Q12836 540 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 NAB1Q13506 487 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 GPR50Q13585 617 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 SGCAQ16586 387 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 HLA-BQ31612 363 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 MS4A18Q3C1V0 323 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 SPOPLQ6IQ16 392 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 REEP3Q6NUK4 255 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 UQCC3Q6UW78 93 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 ENPP6Q6UWR7 440 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 ASCL4Q6XD76 172 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 C17orf107Q6ZR85 190 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 Q6ZRG5 221 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 RFPL4BQ6ZWI9 263 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 ABHD13Q7L211 337 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 APTXQ7Z2E3 356 aaKnown RBP2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 HDDC2Q7Z4H3 204 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 COX8CQ7Z4L0 72 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 SETD3Q86TU7 594 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 TAC4Q86UU9 113 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 DNAJC22Q8N4W6 341 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 RAB42Q8N4Z0 105 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 TRAM1L1Q8N609 369 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 CSNK1A1LQ8N752 337 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 CCNYL1Q8N7R7 359 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 ZNF383Q8NA42 475 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 ZNF738Q8NE65 137 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 NFAM1Q8NET5 270 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 SDR9C7Q8NEX9 313 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 OR5B17Q8NGF7 314 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 OR8K1Q8NGG5 319 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 OR5D18Q8NGL1 313 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 OR6K2Q8NGY2 324 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 OR2T6Q8NHC8 308 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 MAGEE2Q8TD90 523 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 DTD1Q8TEA8 209 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 SAP25Q8TEE9 199 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 APH1AQ96BI3 265 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 TADA1Q96BN2 335 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 CCDC126Q96EE4 140 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 CPB2Q96IY4 423 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 ITCHQ96J02 903 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 C12orf42Q96LP6 360 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 PPP1R36Q96LQ0 422 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 CCDC42Q96M95 316 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 ZNF641Q96N77 438 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 WFIKKN1Q96NZ8 548 aa2.21□□□□□ -2.06
HMGB1P24-202ENST00000615653 MBOAT4Q96T53 435 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms