RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 FBXO42Q6P3S6 717 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 L3MBTL4Q8NA19 623 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 OR2AJ1Q8NGZ0 328 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 SLC38A5Q8WUX1 472 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 GIMAP1Q8WWP7 306 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 MBD2Q9UBB5 411 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 CBLCQ9ULV8 474 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 LIPT1Q9Y234 373 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 TVP23AA6NH52 213 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 AKAP8O43823 692 aaKnown RBP9.98□□□□□ -0.81
FAM3A-221ENST00000612856 RP2O75695 350 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 KCNK5O95279 499 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 RENP00797 406 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 AGFG1P52594 562 aaKnown RBP9.98□□□□□ -0.81
FAM3A-221ENST00000612856 CTXN1P60606 82 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 KCNJ10P78508 379 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 REEP5Q00765 189 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 FGL1Q08830 312 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 PWWP2BQ6NUJ5 590 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 LYPD4Q6UWN0 246 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 IKBIPQ70UQ0 350 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 KLBQ86Z14 1044 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 ADGRF3Q8IZF5 1079 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 LINC00518Q8N0U6 118 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 SLC22A18ASQ8N1D0 253 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 RELL2Q8NC24 303 aaPredicted RBP9.98□□□□□ -0.81
FAM3A-221ENST00000612856 CHST4Q8NCG5 386 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 OR4N2Q8NGD1 307 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 OR52E2Q8NGJ4 325 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 MRPL48Q96GC5 212 aaKnown RBP9.98□□□□□ -0.81
FAM3A-221ENST00000612856 AMDHD1Q96NU7 426 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 RBP7Q96R05 134 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 NIT2Q9NQR4 276 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 B4GALT7Q9UBV7 327 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 TMEM5Q9Y2B1 443 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 CACNG2Q9Y698 323 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 FRMPD3Q5JV73 1810 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 EPG5Q9HCE0 2579 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 UBE2QL1A1L167 161 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 ABOP16442 354 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 PGCP20142 388 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 MC2RQ01718 297 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 LAMTOR1Q6IAA8 161 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 ATCAYQ86WG3 371 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 OR8D4Q8NGM9 314 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 WDR20Q8TBZ3 569 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 TMEM234Q8WY98 164 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 SLC25A46Q96AG3 418 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 MTHFD2LQ9H903 347 aaPredicted RBP9.97□□□□□ -0.81
FAM3A-221ENST00000612856 THSD1Q9NS62 852 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 KLHL42Q9P2K6 505 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 ZNF462Q96JM2 2506 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 SHISA8B8ZZ34 492 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 SULT2B1O00204 365 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 SYNGR4O95473 234 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 HLA-DPB1P04440 258 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 HOXB6P17509 224 aaKnown RBP9.97□□□□□ -0.81
FAM3A-221ENST00000612856 TLE3Q04726 772 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 SMCO1Q147U7 214 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 PON3Q15166 354 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 DUSP5Q16690 384 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 TIGD3Q6B0B8 471 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 CBLL1Q75N03 491 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 TRILQ7L0X0 811 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 CADM4Q8NFZ8 388 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 OR5J2Q8NH18 312 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 CPNE2Q96FN4 548 aaPredicted RBP9.97□□□□□ -0.81
FAM3A-221ENST00000612856 LRRC46Q96FV0 321 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 CXorf58Q96LI9 332 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 SAMD8Q96LT4 415 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 EPYCQ99645 322 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 KATNB1Q9BVA0 655 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 SLITRK2Q9H156 845 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 MYNNQ9NPC7 610 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 CAMK2AQ9UQM7 478 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 CHP2O43745 196 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 PDX1P52945 283 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 TNK1Q13470 666 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 TMEM71Q6P5X7 295 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 C6orf15Q6UXA7 325 aaPredicted RBP9.97□□□□□ -0.81
FAM3A-221ENST00000612856 LINC00469Q8N7U9 141 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 ZNF611Q8N823 705 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 OR1L3Q8NH93 324 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 CLMPQ9H6B4 373 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 SLC52A3Q9NQ40 469 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 PRMT8Q9NR22 394 aaPredicted RBP9.97□□□□□ -0.81
FAM3A-221ENST00000612856 DIMT1Q9UNQ2 313 aaKnown RBP9.97□□□□□ -0.81
FAM3A-221ENST00000612856 TRAPPC4Q9Y296 219 aa9.97□□□□□ -0.81
FAM3A-221ENST00000612856 LRRN3E7EW58 273 aa9.96□□□□□ -0.81
FAM3A-221ENST00000612856 FLRT2O43155 660 aa9.96□□□□□ -0.81
FAM3A-221ENST00000612856 OR2J2O76002 312 aa9.96□□□□□ -0.81
FAM3A-221ENST00000612856 IL1AP01583 271 aa9.96□□□□□ -0.81
FAM3A-221ENST00000612856 SLC6A12P48065 614 aa9.96□□□□□ -0.81
FAM3A-221ENST00000612856 GLYR1Q49A26 553 aaPredicted RBP9.96□□□□□ -0.81
FAM3A-221ENST00000612856 PAN3Q58A45 887 aaKnown RBP9.96□□□□□ -0.81
FAM3A-221ENST00000612856 FAM209BQ5JX69 171 aa9.96□□□□□ -0.81
FAM3A-221ENST00000612856 VHLLQ6RSH7 139 aa9.96□□□□□ -0.81
FAM3A-221ENST00000612856 ZNF550Q7Z398 422 aa9.96□□□□□ -0.81
FAM3A-221ENST00000612856 SPAG16Q8N0X2 631 aa9.96□□□□□ -0.81
FAM3A-221ENST00000612856 MIXL1Q9H2W2 232 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms