RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.4□□□□□ -0.26
CDH1-213ENST00000612417 HSD17B12Q53GQ0 312 aa13.4□□□□□ -0.26
CDH1-213ENST00000612417 TRIM61Q5EBN2 209 aa13.4□□□□□ -0.26
CDH1-213ENST00000612417 LAMTOR1Q6IAA8 161 aa13.4□□□□□ -0.26
CDH1-213ENST00000612417 TTLL10Q6ZVT0 673 aa13.4□□□□□ -0.26
CDH1-213ENST00000612417 CREB3L2Q70SY1 520 aa13.4□□□□□ -0.26
CDH1-213ENST00000612417 KRT74Q7RTS7 529 aa13.4□□□□□ -0.26
CDH1-213ENST00000612417 ZNF440Q8IYI8 595 aa13.4□□□□□ -0.26
CDH1-213ENST00000612417 DTX3Q8N9I9 347 aa13.4□□□□□ -0.26
CDH1-213ENST00000612417 SNX33Q8WV41 574 aa13.4□□□□□ -0.26
CDH1-213ENST00000612417 HYLS1Q96M11 299 aa13.4□□□□□ -0.26
CDH1-213ENST00000612417 CUTCQ9NTM9 273 aa13.4□□□□□ -0.26
CDH1-213ENST00000612417 NUDT15Q9NV35 164 aa13.4□□□□□ -0.26
CDH1-213ENST00000612417 NCDNQ9UBB6 729 aa13.4□□□□□ -0.26
CDH1-213ENST00000612417 CAMK2AQ9UQM7 478 aa13.4□□□□□ -0.26
CDH1-213ENST00000612417 ADAM18Q9Y3Q7 739 aa13.4□□□□□ -0.26
CDH1-213ENST00000612417 TRBV2A0A0J9YWF9 115 aa13.4□□□□□ -0.27
CDH1-213ENST00000612417 FITM1A5D6W6 292 aa13.4□□□□□ -0.27
CDH1-213ENST00000612417 CLDN4O14493 209 aa13.4□□□□□ -0.27
CDH1-213ENST00000612417 ZNF749O43361 778 aa13.4□□□□□ -0.27
CDH1-213ENST00000612417 OR7A10O76100 309 aa13.4□□□□□ -0.27
CDH1-213ENST00000612417 CSTAP01040 98 aa13.4□□□□□ -0.27
CDH1-213ENST00000612417 FOLR1P15328 257 aa13.4□□□□□ -0.27
CDH1-213ENST00000612417 PRKCAP17252 672 aa13.4□□□□□ -0.27
CDH1-213ENST00000612417 SPI1P17947 270 aa13.4□□□□□ -0.27
CDH1-213ENST00000612417 NAA10P41227 235 aaPredicted RBP13.4□□□□□ -0.27
CDH1-213ENST00000612417 RAG2P55895 527 aa13.4□□□□□ -0.27
CDH1-213ENST00000612417 PRPS1P60891 318 aa13.4□□□□□ -0.27
CDH1-213ENST00000612417 FUT7Q11130 342 aa13.4□□□□□ -0.27
CDH1-213ENST00000612417 BCL2L15Q5TBC7 163 aa13.4□□□□□ -0.27
CDH1-213ENST00000612417 RABEPKQ7Z6M1 372 aa13.4□□□□□ -0.27
CDH1-213ENST00000612417 D2HGDHQ8N465 521 aa13.4□□□□□ -0.27
CDH1-213ENST00000612417 TOMM5Q8N4H5 51 aa13.4□□□□□ -0.27
CDH1-213ENST00000612417 LRRC17Q8N6Y2 441 aa13.4□□□□□ -0.27
CDH1-213ENST00000612417 FAM71CQ8NEG0 241 aa13.4□□□□□ -0.27
CDH1-213ENST00000612417 OR51Q1Q8NH59 317 aa13.4□□□□□ -0.27
CDH1-213ENST00000612417 OIT3Q8WWZ8 545 aa13.4□□□□□ -0.27
CDH1-213ENST00000612417 DGAT2Q96PD7 388 aa13.4□□□□□ -0.27
CDH1-213ENST00000612417 PRTFDC1Q9NRG1 225 aa13.4□□□□□ -0.27
CDH1-213ENST00000612417 ZNF275Q9NSD4 429 aaPredicted RBP13.4□□□□□ -0.27
CDH1-213ENST00000612417 OR2W5A6NFC9 320 aa13.39□□□□□ -0.27
CDH1-213ENST00000612417 ZNF879B4DU55 563 aa13.39□□□□□ -0.27
CDH1-213ENST00000612417 LRRN3E7EW58 273 aa13.39□□□□□ -0.27
CDH1-213ENST00000612417 SNRPBP14678 240 aaKnown RBP13.39□□□□□ -0.27
CDH1-213ENST00000612417 PNLIPP16233 465 aa13.39□□□□□ -0.27
CDH1-213ENST00000612417 RPL4P36578 427 aaKnown RBP13.39□□□□□ -0.27
CDH1-213ENST00000612417 SRP9P49458 86 aaKnown RBP13.39□□□□□ -0.27
CDH1-213ENST00000612417 ZNF267Q14586 743 aaPredicted RBP13.39□□□□□ -0.27
CDH1-213ENST00000612417 PEAR1Q5VY43 1037 aaPredicted RBP13.39□□□□□ -0.27
CDH1-213ENST00000612417 LYPD4Q6UWN0 246 aa13.39□□□□□ -0.27
CDH1-213ENST00000612417 PRSS42Q7Z5A4 293 aa13.39□□□□□ -0.27
CDH1-213ENST00000612417 BCORP1Q8N888 145 aa13.39□□□□□ -0.27
CDH1-213ENST00000612417 OR4D9Q8NGE8 314 aa13.39□□□□□ -0.27
CDH1-213ENST00000612417 OR51L1Q8NGJ5 315 aa13.39□□□□□ -0.27
CDH1-213ENST00000612417 OR1L3Q8NH93 324 aa13.39□□□□□ -0.27
CDH1-213ENST00000612417 C16orf52Q8NHV5 167 aa13.39□□□□□ -0.27
CDH1-213ENST00000612417 DEDD2Q8WXF8 326 aa13.39□□□□□ -0.27
CDH1-213ENST00000612417 C3orf49Q96BT1 292 aa13.39□□□□□ -0.27
CDH1-213ENST00000612417 OR14A2Q96R54 314 aa13.39□□□□□ -0.27
CDH1-213ENST00000612417 TTTY10Q9BZA0 68 aa13.39□□□□□ -0.27
CDH1-213ENST00000612417 MED28Q9H204 178 aa13.39□□□□□ -0.27
CDH1-213ENST00000612417 LRRN3Q9H3W5 708 aa13.39□□□□□ -0.27
CDH1-213ENST00000612417 BRD7Q9NPI1 651 aa13.39□□□□□ -0.27
CDH1-213ENST00000612417 TEKT2Q9UIF3 430 aa13.39□□□□□ -0.27
CDH1-213ENST00000612417 GNG8Q9UK08 70 aa13.39□□□□□ -0.27
CDH1-213ENST00000612417 ASCC3Q8N3C0 2202 aaKnown RBP13.38□□□□□ -0.27
CDH1-213ENST00000612417 OR6C68A6NDL8 312 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 GNB5O14775 395 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 MAGEB4O15481 346 aaPredicted RBP13.38□□□□□ -0.27
CDH1-213ENST00000612417 CER1O95813 267 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 TCRBP04435 133 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 EDNRAP25101 427 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 BTG2P78543 158 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 CCL7P80098 99 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 BTBD16Q32M84 506 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 UBE2NLQ5JXB2 153 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 TMEM71Q6P5X7 295 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 OR4C3Q8NH37 302 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 SMIM4Q8WVI0 70 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 ZNRF4Q8WWF5 429 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 LIPHQ8WWY8 451 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 SLC41A2Q96JW4 573 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 OR2M2Q96R28 347 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 NMNAT3Q96T66 252 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 EMC7Q9NPA0 242 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 DHCR7Q9UBM7 475 aaKnown RBP13.38□□□□□ -0.27
CDH1-213ENST00000612417 COPS3Q9UNS2 423 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 TMEM184BQ9Y519 407 aaPredicted RBP13.38□□□□□ -0.27
CDH1-213ENST00000612417 PCDHGA9Q9Y5G4 932 aaKnown RBP13.38□□□□□ -0.27
CDH1-213ENST00000612417 LY6G6EA0A0G2JKS1 128 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 H0YIG0 161 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 SELENOFO60613 162 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 GLCEO94923 617 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 PRKACBP22694 351 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 STOMP27105 288 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 GALNSP34059 522 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 ADH7P40394 386 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 OR1D4P47884 311 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 GNG2P59768 71 aa13.38□□□□□ -0.27
CDH1-213ENST00000612417 DGCR2P98153 550 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms