RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 SEC61A2Q9H9S3 476 aa15.43■□□□□ 0.06
SSBP1-215ENST00000612337 KCNS2Q9ULS6 477 aa15.43■□□□□ 0.06
SSBP1-215ENST00000612337 USH1CQ9Y6N9 552 aa15.43■□□□□ 0.06
SSBP1-215ENST00000612337 LOC102725191A0A1B0GVB3 256 aa15.42■□□□□ 0.06
SSBP1-215ENST00000612337 A0A1B0GWA3 101 aa15.42■□□□□ 0.06
SSBP1-215ENST00000612337 M0R082 166 aa15.42■□□□□ 0.06
SSBP1-215ENST00000612337 CBR1P16152 277 aa15.42■□□□□ 0.06
SSBP1-215ENST00000612337 IGFBP5P24593 272 aa15.42■□□□□ 0.06
SSBP1-215ENST00000612337 HTR2AP28223 471 aa15.42■□□□□ 0.06
SSBP1-215ENST00000612337 THBS2P35442 1172 aa15.42■□□□□ 0.06
SSBP1-215ENST00000612337 C1DQ13901 141 aaKnown RBP15.42■□□□□ 0.06
SSBP1-215ENST00000612337 LRIF1Q5T3J3 769 aa15.42■□□□□ 0.06
SSBP1-215ENST00000612337 FAM166AQ6J272 317 aa15.42■□□□□ 0.06
SSBP1-215ENST00000612337 NET1Q7Z628 596 aaPredicted RBP15.42■□□□□ 0.06
SSBP1-215ENST00000612337 GPR137CQ8N3F9 429 aa15.42■□□□□ 0.06
SSBP1-215ENST00000612337 ARIH2OSQ8N7S6 290 aa15.42■□□□□ 0.06
SSBP1-215ENST00000612337 ZNF540Q8NDQ6 660 aa15.42■□□□□ 0.06
SSBP1-215ENST00000612337 ZNF417Q8TAU3 575 aa15.42■□□□□ 0.06
SSBP1-215ENST00000612337 DNAJA4Q8WW22 397 aaPredicted RBP15.42■□□□□ 0.06
SSBP1-215ENST00000612337 FOXN4Q96NZ1 517 aa15.42■□□□□ 0.06
SSBP1-215ENST00000612337 ZNF587Q96SQ5 575 aaPredicted RBP15.42■□□□□ 0.06
SSBP1-215ENST00000612337 RAB1BQ9H0U4 201 aa15.42■□□□□ 0.06
SSBP1-215ENST00000612337 ZNF442Q9H7R0 627 aa15.42■□□□□ 0.06
SSBP1-215ENST00000612337 GPR35Q9HC97 309 aa15.42■□□□□ 0.06
SSBP1-215ENST00000612337 SLC25A37Q9NYZ2 338 aa15.42■□□□□ 0.06
SSBP1-215ENST00000612337 IGKV1D-42A0A075B6H8 117 aa15.41■□□□□ 0.06
SSBP1-215ENST00000612337 TRAV36DV7A0A075B6V5 113 aa15.41■□□□□ 0.06
SSBP1-215ENST00000612337 IGHV4-61A0A0C4DH41 118 aa15.41■□□□□ 0.06
SSBP1-215ENST00000612337 LOC100289279A0A1B0GTE1 492 aa15.41■□□□□ 0.06
SSBP1-215ENST00000612337 AKAP8O43823 692 aaKnown RBP15.41■□□□□ 0.06
SSBP1-215ENST00000612337 CELA3BP08861 270 aa15.41■□□□□ 0.06
SSBP1-215ENST00000612337 ARAFP10398 606 aa15.41■□□□□ 0.06
SSBP1-215ENST00000612337 APEHP13798 732 aaKnown RBP15.41■□□□□ 0.06
SSBP1-215ENST00000612337 GRPRP30550 384 aa15.41■□□□□ 0.06
SSBP1-215ENST00000612337 IDH3GP51553 393 aaPredicted RBP15.41■□□□□ 0.06
SSBP1-215ENST00000612337 STX1BP61266 288 aa15.41■□□□□ 0.06
SSBP1-215ENST00000612337 HGFACQ04756 655 aa15.41■□□□□ 0.06
SSBP1-215ENST00000612337 CARTPTQ16568 116 aa15.41■□□□□ 0.06
SSBP1-215ENST00000612337 CEACAM16Q2WEN9 425 aa15.41■□□□□ 0.06
SSBP1-215ENST00000612337 ALG10BQ5I7T1 473 aa15.41■□□□□ 0.06
SSBP1-215ENST00000612337 GCNT6Q5T4J0 391 aa15.41■□□□□ 0.06
SSBP1-215ENST00000612337 DHRS4L2Q6PKH6 230 aa15.41■□□□□ 0.06
SSBP1-215ENST00000612337 H1FNTQ75WM6 255 aaPredicted RBP15.41■□□□□ 0.06
SSBP1-215ENST00000612337 MYPOPQ86VE0 399 aaPredicted RBP15.41■□□□□ 0.06
SSBP1-215ENST00000612337 MSRB3Q8IXL7 192 aa15.41■□□□□ 0.06
SSBP1-215ENST00000612337 CCDC36Q8IYA8 594 aa15.41■□□□□ 0.06
SSBP1-215ENST00000612337 ADPRHL1Q8NDY3 354 aa15.41■□□□□ 0.06
SSBP1-215ENST00000612337 PIK3C3Q8NEB9 887 aa15.41■□□□□ 0.06
SSBP1-215ENST00000612337 NFKBIDQ8NI38 313 aa15.41■□□□□ 0.06
SSBP1-215ENST00000612337 MSI2Q96DH6 328 aaKnown RBP15.41■□□□□ 0.06
SSBP1-215ENST00000612337 ZNF837Q96EG3 531 aaPredicted RBP15.41■□□□□ 0.06
SSBP1-215ENST00000612337 OR2M2Q96R28 347 aa15.41■□□□□ 0.06
SSBP1-215ENST00000612337 SPATA5L1Q9BVQ7 753 aa15.41■□□□□ 0.06
SSBP1-215ENST00000612337 CRLF2Q9HC73 371 aa15.41■□□□□ 0.06
SSBP1-215ENST00000612337 SLAMF8Q9P0V8 285 aa15.41■□□□□ 0.06
SSBP1-215ENST00000612337 IGHV2OR16-5A0A0B4J2B6 119 aa15.4■□□□□ 0.06
SSBP1-215ENST00000612337 SLC35F4A4IF30 521 aa15.4■□□□□ 0.06
SSBP1-215ENST00000612337 VSTM5A8MXK1 200 aa15.4■□□□□ 0.06
SSBP1-215ENST00000612337 TRAF3IP2O43734 574 aaPredicted RBP15.4■□□□□ 0.06
SSBP1-215ENST00000612337 THBS4P35443 961 aa15.4■□□□□ 0.06
SSBP1-215ENST00000612337 ARR3P36575 388 aa15.4■□□□□ 0.06
SSBP1-215ENST00000612337 MFSD13AQ14CX5 517 aa15.4■□□□□ 0.06
SSBP1-215ENST00000612337 IQCCQ4KMZ1 466 aa15.4■□□□□ 0.06
SSBP1-215ENST00000612337 FAM91A1Q658Y4 838 aa15.4■□□□□ 0.06
SSBP1-215ENST00000612337 REEP3Q6NUK4 255 aa15.4■□□□□ 0.06
SSBP1-215ENST00000612337 ULK3Q6PHR2 472 aa15.4■□□□□ 0.06
SSBP1-215ENST00000612337 BLOC1S3Q6QNY0 202 aa15.4■□□□□ 0.06
SSBP1-215ENST00000612337 COMTD1Q86VU5 262 aa15.4■□□□□ 0.06
SSBP1-215ENST00000612337 KRT73Q86Y46 540 aa15.4■□□□□ 0.06
SSBP1-215ENST00000612337 FUNDC1Q8IVP5 155 aa15.4■□□□□ 0.06
SSBP1-215ENST00000612337 TMEM123Q8N131 208 aa15.4■□□□□ 0.06
SSBP1-215ENST00000612337 BPESC1Q9GZL8 116 aa15.4■□□□□ 0.06
SSBP1-215ENST00000612337 CHODLQ9H9P2 273 aa15.4■□□□□ 0.06
SSBP1-215ENST00000612337 TCF7L2Q9NQB0 619 aa15.4■□□□□ 0.06
SSBP1-215ENST00000612337 KLHL14Q9P2G3 628 aa15.4■□□□□ 0.06
SSBP1-215ENST00000612337 USP22Q9UPT9 525 aa15.4■□□□□ 0.06
SSBP1-215ENST00000612337 GMEB1Q9Y692 573 aa15.4■□□□□ 0.06
SSBP1-215ENST00000612337 ZNF503-AS2A6NEH8 195 aa15.39■□□□□ 0.05
SSBP1-215ENST00000612337 ZNF99A8MXY4 864 aaPredicted RBP15.39■□□□□ 0.05
SSBP1-215ENST00000612337 hCG_2039718K7EN88 272 aa15.39■□□□□ 0.05
SSBP1-215ENST00000612337 POLR3GO15318 223 aaPredicted RBP15.39■□□□□ 0.05
SSBP1-215ENST00000612337 TGDSO95455 350 aa15.39■□□□□ 0.05
SSBP1-215ENST00000612337 ZNF23P17027 643 aa15.39■□□□□ 0.05
SSBP1-215ENST00000612337 SRD5A1P18405 259 aa15.39■□□□□ 0.05
SSBP1-215ENST00000612337 NPR2P20594 1047 aa15.39■□□□□ 0.05
SSBP1-215ENST00000612337 PPIBP23284 216 aaKnown RBP15.39■□□□□ 0.05
SSBP1-215ENST00000612337 CDK6Q00534 326 aa15.39■□□□□ 0.05
SSBP1-215ENST00000612337 IL1RL1Q01638 556 aa15.39■□□□□ 0.05
SSBP1-215ENST00000612337 NPRL3Q12980 569 aa15.39■□□□□ 0.05
SSBP1-215ENST00000612337 FAM120AOSQ5T036 256 aa15.39■□□□□ 0.05
SSBP1-215ENST00000612337 UEVLDQ8IX04 471 aa15.39■□□□□ 0.05
SSBP1-215ENST00000612337 C10orf111Q8N326 155 aa15.39■□□□□ 0.05
SSBP1-215ENST00000612337 IL17RDQ8NFM7 739 aa15.39■□□□□ 0.05
SSBP1-215ENST00000612337 OR6S1Q8NH40 331 aa15.39■□□□□ 0.05
SSBP1-215ENST00000612337 NEU4Q8WWR8 484 aaPredicted RBP15.39■□□□□ 0.05
SSBP1-215ENST00000612337 SPDL1Q96EA4 605 aa15.39■□□□□ 0.05
SSBP1-215ENST00000612337 SLC47A1Q96FL8 570 aa15.39■□□□□ 0.05
SSBP1-215ENST00000612337 SLC41A3Q96GZ6 507 aa15.39■□□□□ 0.05
SSBP1-215ENST00000612337 C7orf26Q96N11 449 aa15.39■□□□□ 0.05
SSBP1-215ENST00000612337 ANKRD27Q96NW4 1050 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms