RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 FGD2Q7Z6J4 655 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 JAZF1Q86VZ6 243 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 GLB1L2Q8IW92 636 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 ZNF784Q8NCA9 323 aaPredicted RBP12.84□□□□□ -0.35
COL6A1-207ENST00000612273 ELOA3Q8NG57 546 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 OR13H1Q8NG92 308 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 ATOH1Q92858 354 aaPredicted RBP12.84□□□□□ -0.35
COL6A1-207ENST00000612273 S100A16Q96FQ6 103 aaKnown RBP12.84□□□□□ -0.35
COL6A1-207ENST00000612273 GAL3ST4Q96RP7 486 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 TRIM2Q9C040 744 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 WDR76Q9H967 626 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 INPP5EQ9NRR6 644 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 PCDHGA9Q9Y5G4 932 aaKnown RBP12.84□□□□□ -0.35
COL6A1-207ENST00000612273 MEIKINA0A087WXM9 373 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 A0A1B0GVI7 797 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 ANXA2P2A6NMY6 339 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 L7N2F9 121 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 KDM4BO94953 1096 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 IFNA7P01567 189 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 ANXA2P07355 339 aaKnown RBP12.84□□□□□ -0.35
COL6A1-207ENST00000612273 SULT1A3P0DMM9 295 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 SULT1A4P0DMN0 295 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 NFATC4Q14934 902 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 SLC22A10Q63ZE4 541 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 RPL22L1Q6P5R6 122 aaKnown RBP12.84□□□□□ -0.35
COL6A1-207ENST00000612273 NPSR1Q6W5P4 371 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 OR51D1Q8NGF3 324 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 OR5M1Q8NGP8 315 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 TM4SF19Q96DZ7 209 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 SARGQ9BW04 601 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 RXFP3Q9NSD7 469 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 KLHL9Q9P2J3 617 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 TRAV8-7A0A075B6U6 113 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 SMIM10L1P0DMW3 83 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 DIO1P49895 249 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 ACTA2P62736 377 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 ACTG2P63267 376 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 HTR4Q13639 388 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 TRAM1Q15629 374 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 OOSP2Q86WS3 158 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 BOLLQ8N9W6 283 aaKnown RBP12.84□□□□□ -0.35
COL6A1-207ENST00000612273 LSM14AQ8ND56 463 aaKnown RBP12.84□□□□□ -0.35
COL6A1-207ENST00000612273 NT5CQ8TCD5 201 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 SMIM10Q96HG1 83 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 SORCS2Q96PQ0 1159 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 MS4A7Q9GZW8 240 aaPredicted RBP12.84□□□□□ -0.35
COL6A1-207ENST00000612273 ENTPD2Q9Y5L3 495 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 URB1O60287 2271 aaKnown RBP12.83□□□□□ -0.35
COL6A1-207ENST00000612273 RPS4Y1P22090 263 aaKnown RBP12.83□□□□□ -0.36
COL6A1-207ENST00000612273 GALP22466 123 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 ARHGDIBP52566 201 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 OPCMLQ14982 345 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 PCGF3Q3KNV8 242 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 UBE2NLQ5JXB2 153 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 ZNF782Q6ZMW2 699 aaPredicted RBP12.83□□□□□ -0.36
COL6A1-207ENST00000612273 SLITRK4Q8IW52 837 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 GALNT11Q8NCW6 608 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 TMEM106AQ96A25 262 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 SYT4Q9H2B2 425 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 SCP2D1Q9UJQ7 156 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 A0A1W2PPL8 197 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 A0A1W2PQF6 199 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 OGG1O15527 345 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 ADRA2CP18825 462 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 PRKACBP22694 351 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 GRK6P43250 576 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 EFNB2P52799 333 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 FOXL2P58012 376 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 C1QL3Q5VWW1 255 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 ARMC6Q6NXE6 501 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 ZNF321PQ8N8H1 164 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 C16orf52Q8NHV5 167 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 ZNF563Q8TA94 476 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 MMABQ96EY8 250 aaPredicted RBP12.83□□□□□ -0.36
COL6A1-207ENST00000612273 JAM3Q9BX67 310 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 NTMQ9P121 344 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 ZNF281Q9Y2X9 895 aa12.83□□□□□ -0.36
COL6A1-207ENST00000612273 C2orf74A8MZ97 194 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 PYCARD-AS1I3L0S3 204 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 APEHP13798 732 aaKnown RBP12.82□□□□□ -0.36
COL6A1-207ENST00000612273 P2RX1P51575 399 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 CBFBQ13951 182 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 CD226Q15762 336 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 C2orf68Q2NKX9 166 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 C9orf50Q5SZB4 431 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 STAC2Q6ZMT1 411 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 FAM220AQ7Z4H9 259 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 TMED4Q7Z7H5 227 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 OR5AK2Q8NH90 309 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 NSMAFQ92636 917 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 NKD1Q969G9 470 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 ZNF524Q96C55 264 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 PBX4Q9BYU1 374 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 OR8D2Q9GZM6 311 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 Q9N2J8 555 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 PNO1Q9NRX1 252 aaKnown RBP12.82□□□□□ -0.36
COL6A1-207ENST00000612273 CDV3Q9UKY7 258 aaKnown RBP12.82□□□□□ -0.36
COL6A1-207ENST00000612273 MAB21L2Q9Y586 359 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 SLCO1B1Q9Y6L6 691 aa12.82□□□□□ -0.36
COL6A1-207ENST00000612273 TRAV1-2A0A0B4J238 106 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms