RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 A0A1W2PPR1 153 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 HTR3EA5X5Y0 456 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 KPNA4O00629 521 aaPredicted RBP10.84□□□□□ -0.67
CBWD3-208ENST00000612050 DYNC1I1O14576 645 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 RNF13O43567 381 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 SNX3O60493 162 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 SERPINI2O75830 405 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 OR5F1O95221 314 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 ZNF682O95780 498 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 BGLAPP02818 100 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 IFNW1P05000 195 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 EDNRAP25101 427 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 P2RY4P51582 365 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 SLC7A2P52569 658 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 SELENOWP63302 87 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 ROR2Q01974 943 aaKnown RBP10.84□□□□□ -0.67
CBWD3-208ENST00000612050 LIPEQ05469 1076 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 ZNF672Q499Z4 452 aaPredicted RBP10.84□□□□□ -0.67
CBWD3-208ENST00000612050 AGAP6Q5VW22 663 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 ANKRD16Q6P6B7 361 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 NANOGNBQ7Z5D8 188 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 PXKQ7Z7A4 578 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 CYP4Z1Q86W10 505 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 EPHX4Q8IUS5 362 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 CCDC36Q8IYA8 594 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 ZIC4Q8N9L1 334 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 OR6N1Q8NGY5 312 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 PERPQ96FX8 193 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 ADAD1Q96M93 576 aaKnown RBP10.84□□□□□ -0.67
CBWD3-208ENST00000612050 KCTD14Q9BQ13 255 aaPredicted RBP10.84□□□□□ -0.67
CBWD3-208ENST00000612050 AMBRA1Q9C0C7 1298 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 SPAG4Q9NPE6 437 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 NDE1Q9NXR1 346 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 CISD1Q9NZ45 108 aaKnown RBP10.84□□□□□ -0.67
CBWD3-208ENST00000612050 ZNF229Q9UJW7 825 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 RPS6KA6Q9UK32 745 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 LAMP3Q9UQV4 416 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 MED31Q9Y3C7 131 aa10.84□□□□□ -0.67
CBWD3-208ENST00000612050 DSCAMO60469 2012 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 A0A1W2PR80 420 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 VSTM5A8MXK1 200 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 C11orf98E9PRG8 122 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 PDLIM1O00151 329 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 CXCR6O00574 342 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 TPST2O60704 377 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 FZD7O75084 574 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 CH25HO95992 272 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 PLAUP00749 431 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 PTNP21246 168 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 CD40P25942 277 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 LOXP28300 417 aaPredicted RBP10.83□□□□□ -0.68
CBWD3-208ENST00000612050 NTF4P34130 210 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 CAPZA2P47755 286 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 MXRA7P84157 204 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 TAF11Q15544 211 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 Q5PR19 223 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 PRSS57Q6UWY2 283 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 RRM2BQ7LG56 351 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 CDK20Q8IZL9 346 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 FBXL14Q8N1E6 418 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 KBTBD8Q8NFY9 601 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 OR1K1Q8NGR3 316 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 SMAP2Q8WU79 429 aaPredicted RBP10.83□□□□□ -0.68
CBWD3-208ENST00000612050 GEMIN6Q8WXD5 167 aaKnown RBP10.83□□□□□ -0.68
CBWD3-208ENST00000612050 NANOS1Q8WY41 292 aaKnown RBP10.83□□□□□ -0.68
CBWD3-208ENST00000612050 LRRC37BQ96QE4 947 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 FNDC11Q9BVV2 318 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 NDEL1Q9GZM8 345 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 ADA2Q9NZK5 511 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 STX18Q9P2W9 335 aaKnown RBP10.83□□□□□ -0.68
CBWD3-208ENST00000612050 RIMS3Q9UJD0 308 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 POFUT2Q9Y2G5 429 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 ARL2BPQ9Y2Y0 163 aa10.83□□□□□ -0.68
CBWD3-208ENST00000612050 ABCA4P78363 2273 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 A0A1W2PRG6 482 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 DPRXA6NFQ7 191 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 FAM171A2A8MVW0 826 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 MCIDASD6RGH6 385 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 PLPP3O14495 311 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 CRYAAP02489 173 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 MT-ND1P03886 318 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 NR2C1P13056 603 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 OR1E2P47887 323 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 MNAT1P51948 309 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 ADAM8P78325 824 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 ETFDHQ16134 617 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 ZNF74Q16587 644 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 TBRG1Q3YBR2 411 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 IFI44LQ53G44 452 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 CARD17Q5XLA6 110 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 LINC00114Q6XXX2 140 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 RBM45Q8IUH3 476 aaKnown RBP10.82□□□□□ -0.68
CBWD3-208ENST00000612050 SLC15A3Q8IY34 581 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 MAGEE2Q8TD90 523 aaPredicted RBP10.82□□□□□ -0.68
CBWD3-208ENST00000612050 TMEM239Q8WW34 195 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 LRR1Q96L50 414 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 PRRC1Q96M27 445 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 MOGAT1Q96PD6 335 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 BDH2Q9BUT1 245 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 C1QTNF6Q9BXI9 259 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms