RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 CD8B2A6NJW9 211 aa14.63□□□□□ -0.07
RTN1-209ENST00000611068 UBE2CO00762 179 aa14.63□□□□□ -0.07
RTN1-209ENST00000611068 HMGN2P05204 90 aaKnown RBP14.63□□□□□ -0.07
RTN1-209ENST00000611068 CD8BP10966 210 aa14.63□□□□□ -0.07
RTN1-209ENST00000611068 FGF9P31371 208 aaPredicted RBP14.63□□□□□ -0.07
RTN1-209ENST00000611068 PCGF2P35227 344 aa14.63□□□□□ -0.07
RTN1-209ENST00000611068 PITPNBP48739 271 aa14.63□□□□□ -0.07
RTN1-209ENST00000611068 ZXDAP98168 799 aa14.63□□□□□ -0.07
RTN1-209ENST00000611068 ABHD13Q7L211 337 aa14.63□□□□□ -0.07
RTN1-209ENST00000611068 MAMDC2Q7Z304 686 aaPredicted RBP14.63□□□□□ -0.07
RTN1-209ENST00000611068 TMEM17Q86X19 198 aa14.63□□□□□ -0.07
RTN1-209ENST00000611068 SLC30A8Q8IWU4 369 aa14.63□□□□□ -0.07
RTN1-209ENST00000611068 SAMD12Q8N8I0 201 aa14.63□□□□□ -0.07
RTN1-209ENST00000611068 OR5M3Q8NGP4 307 aa14.63□□□□□ -0.07
RTN1-209ENST00000611068 NT5CQ8TCD5 201 aa14.63□□□□□ -0.07
RTN1-209ENST00000611068 TMEM19Q96HH6 336 aa14.63□□□□□ -0.07
RTN1-209ENST00000611068 C20orf85Q9H1P6 137 aa14.63□□□□□ -0.07
RTN1-209ENST00000611068 DAPP1Q9UN19 280 aa14.63□□□□□ -0.07
RTN1-209ENST00000611068 OR10H1Q9Y4A9 318 aa14.63□□□□□ -0.07
RTN1-209ENST00000611068 A0A1W2PPE3 182 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 SLC28A2O43868 658 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 EIF2S3P41091 472 aaKnown RBP14.62□□□□□ -0.07
RTN1-209ENST00000611068 WNT4P56705 351 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 DGCR2P98153 550 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 NAA40Q86UY6 237 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 KLBQ86Z14 1044 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 SVBPQ8N300 66 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 OR56B4Q8NH76 319 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 DNASE2BQ8WZ79 361 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 NEURL3Q96EH8 262 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 SPOCK3Q9BQ16 436 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 WFDC6Q9BQY6 131 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 NANSQ9NR45 359 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 PATE3B3GLJ2 98 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 C5orf58C9J3I9 102 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 PRAMEF2O60811 474 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 SOX30O94993 753 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 PEPDP12955 493 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 CSNK2A2P19784 350 aaPredicted RBP14.62□□□□□ -0.07
RTN1-209ENST00000611068 GABRA5P31644 462 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 BUD31P41223 144 aaPredicted RBP14.62□□□□□ -0.07
RTN1-209ENST00000611068 CAPZBP47756 277 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 SNRPGP62308 76 aaKnown RBP14.62□□□□□ -0.07
RTN1-209ENST00000611068 TRA2BP62995 288 aaKnown RBP14.62□□□□□ -0.07
RTN1-209ENST00000611068 DCDP81605 110 aaKnown RBP14.62□□□□□ -0.07
RTN1-209ENST00000611068 SLC3A1Q07837 685 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 PDZK1IP1Q13113 114 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 TPBGQ13641 420 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 VEZF1Q14119 521 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 SMCO1Q147U7 214 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 SFRP4Q6FHJ7 346 aaPredicted RBP14.62□□□□□ -0.07
RTN1-209ENST00000611068 IQCHQ86VS3 1027 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 SLC35F3Q8IY50 421 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 TMEM185AQ8NFB2 350 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 UBL7Q96S82 380 aaPredicted RBP14.62□□□□□ -0.07
RTN1-209ENST00000611068 NEUROD4Q9HD90 331 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 NPDC1Q9NQX5 325 aaPredicted RBP14.62□□□□□ -0.07
RTN1-209ENST00000611068 ACER3Q9NUN7 267 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 FXYD6-FXYD2A0A087WZ82 144 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 PRR23D1E9PI22 279 aaPredicted RBP14.62□□□□□ -0.07
RTN1-209ENST00000611068 E9PI62 339 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 CFIP05156 583 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 PRR23D2P0DMB1 279 aaPredicted RBP14.62□□□□□ -0.07
RTN1-209ENST00000611068 NPR2P20594 1047 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 FRKP42685 505 aaPredicted RBP14.62□□□□□ -0.07
RTN1-209ENST00000611068 FASLGP48023 281 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 NPBWR1P48145 328 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 OC90Q02509 493 aaPredicted RBP14.62□□□□□ -0.07
RTN1-209ENST00000611068 MINDY4Q4G0A6 757 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 C14orf28Q4W4Y0 310 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 LYSMD4Q5XG99 296 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 TTC28Q96AY4 2481 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 C14orf144Q96I85 54 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 SLC35G5Q96KT7 338 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 SERINC2Q96SA4 455 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 FXYD6Q9H0Q3 95 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 DUSP15Q9H1R2 295 aaPredicted RBP14.62□□□□□ -0.07
RTN1-209ENST00000611068 NMNAT1Q9HAN9 279 aaPredicted RBP14.62□□□□□ -0.07
RTN1-209ENST00000611068 MRPL15Q9P015 296 aaKnown RBP14.62□□□□□ -0.07
RTN1-209ENST00000611068 CLEC4AQ9UMR7 237 aa14.62□□□□□ -0.07
RTN1-209ENST00000611068 SEC16AO15027 2179 aa14.61□□□□□ -0.07
RTN1-209ENST00000611068 SMIM10L1P0DMW3 83 aa14.61□□□□□ -0.07
RTN1-209ENST00000611068 NFYBP25208 207 aa14.61□□□□□ -0.07
RTN1-209ENST00000611068 MPIP34949 423 aa14.61□□□□□ -0.07
RTN1-209ENST00000611068 GCGRP47871 477 aa14.61□□□□□ -0.07
RTN1-209ENST00000611068 PSMD4P55036 377 aaKnown RBP14.61□□□□□ -0.07
RTN1-209ENST00000611068 FABP9Q0Z7S8 132 aa14.61□□□□□ -0.07
RTN1-209ENST00000611068 TRMT12Q53H54 448 aaKnown RBP14.61□□□□□ -0.07
RTN1-209ENST00000611068 OR7E24Q6IFN5 339 aa14.61□□□□□ -0.07
RTN1-209ENST00000611068 CD200R1LQ6Q8B3 271 aa14.61□□□□□ -0.07
RTN1-209ENST00000611068 FAM111BQ6SJ93 734 aa14.61□□□□□ -0.07
RTN1-209ENST00000611068 RNF44Q7L0R7 432 aa14.61□□□□□ -0.07
RTN1-209ENST00000611068 IQCF1Q8N6M8 205 aa14.61□□□□□ -0.07
RTN1-209ENST00000611068 SMIM10Q96HG1 83 aa14.61□□□□□ -0.07
RTN1-209ENST00000611068 MEGF10Q96KG7 1140 aa14.61□□□□□ -0.07
RTN1-209ENST00000611068 ZNF681Q96N22 645 aa14.61□□□□□ -0.07
RTN1-209ENST00000611068 OR10A4Q9H209 315 aa14.61□□□□□ -0.07
RTN1-209ENST00000611068 SMOC1Q9H4F8 434 aa14.61□□□□□ -0.07
RTN1-209ENST00000611068 ZFP57Q9NU63 452 aa14.61□□□□□ -0.07
RTN1-209ENST00000611068 ACSS1Q9NUB1 689 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms