RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 ABOP16442 354 aa10.94□□□□□ -0.66
TP53-220ENST00000610623 UBE2MP61081 183 aaKnown RBP10.94□□□□□ -0.66
TP53-220ENST00000610623 SRSF4Q08170 494 aaKnown RBP10.94□□□□□ -0.66
TP53-220ENST00000610623 TGM3Q08188 693 aa10.94□□□□□ -0.66
TP53-220ENST00000610623 COL9A2Q14055 689 aaPredicted RBP10.94□□□□□ -0.66
TP53-220ENST00000610623 SMCO1Q147U7 214 aa10.94□□□□□ -0.66
TP53-220ENST00000610623 LASP1Q14847 261 aaKnown RBP10.94□□□□□ -0.66
TP53-220ENST00000610623 PCGF3Q3KNV8 242 aa10.94□□□□□ -0.66
TP53-220ENST00000610623 NUDT13Q86X67 352 aa10.94□□□□□ -0.66
TP53-220ENST00000610623 RASGEF1AQ8N9B8 481 aa10.94□□□□□ -0.66
TP53-220ENST00000610623 OR4C16Q8NGL9 310 aa10.94□□□□□ -0.66
TP53-220ENST00000610623 CCDC107Q8WV48 283 aa10.94□□□□□ -0.66
TP53-220ENST00000610623 ING5Q8WYH8 240 aa10.94□□□□□ -0.66
TP53-220ENST00000610623 RELTQ969Z4 430 aa10.94□□□□□ -0.66
TP53-220ENST00000610623 PELI1Q96FA3 418 aa10.94□□□□□ -0.66
TP53-220ENST00000610623 CNTNAP3BQ96NU0 1288 aa10.94□□□□□ -0.66
TP53-220ENST00000610623 F2RL3Q96RI0 385 aa10.94□□□□□ -0.66
TP53-220ENST00000610623 GFI1Q99684 422 aa10.94□□□□□ -0.66
TP53-220ENST00000610623 MS4A8Q9BY19 250 aa10.94□□□□□ -0.66
TP53-220ENST00000610623 TLNRD1Q9H1K6 362 aa10.94□□□□□ -0.66
TP53-220ENST00000610623 C1orf198Q9H425 327 aa10.94□□□□□ -0.66
TP53-220ENST00000610623 SIDT1Q9NXL6 827 aaKnown RBP10.94□□□□□ -0.66
TP53-220ENST00000610623 TRBV2A0A0J9YWF9 115 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 PMS2P1A4D2B8 440 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 OR5H14A6NHG9 310 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 HMGN2P05204 90 aaKnown RBP10.93□□□□□ -0.66
TP53-220ENST00000610623 MELTFP08582 738 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 PRKAG1P54619 331 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 FXYD6P3P58550 94 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 TAS2R38P59533 333 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 CXADRP78310 365 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 PRR5P85299 388 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 HABP2Q14520 560 aaPredicted RBP10.93□□□□□ -0.66
TP53-220ENST00000610623 LRRC73Q5JTD7 316 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 RAB12Q6IQ22 244 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 LPCAT3Q6P1A2 487 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 ACOT7LQ6ZUV0 252 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 RNF113BQ8IZP6 322 aaKnown RBP10.93□□□□□ -0.66
TP53-220ENST00000610623 ARL11Q969Q4 196 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 MOAP1Q96BY2 351 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 ZNF75AQ96N20 296 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 ZNF285Q96NJ3 590 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 VRK1Q99986 396 aaPredicted RBP10.93□□□□□ -0.66
TP53-220ENST00000610623 NOX4Q9NPH5 578 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 ASF1BQ9NVP2 202 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 OR5V1Q9UGF6 321 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 ADAM29Q9UKF5 820 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 RIIAD1A6NNX1 92 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 MAN2B1O00754 1011 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 GLSO94925 669 aaPredicted RBP10.93□□□□□ -0.66
TP53-220ENST00000610623 PRF1P14222 555 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 IL9P15248 144 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 PTAFRP25105 342 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 NTSP30990 170 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 NPBWR1P48145 328 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 TRA2BP62995 288 aaKnown RBP10.93□□□□□ -0.66
TP53-220ENST00000610623 CLN3Q13286 438 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 PEA15Q15121 130 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 RPE65Q16518 533 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 TP53I3Q53FA7 332 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 LY6G6FQ5SQ64 297 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 C11orf87Q6NUJ2 197 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 LCTLQ6UWM7 567 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 RBMS3Q6XE24 437 aaKnown RBP10.93□□□□□ -0.66
TP53-220ENST00000610623 SSX6Q7RTT6 188 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 MISPQ8IVT2 679 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 BOLLQ8N9W6 283 aaKnown RBP10.93□□□□□ -0.66
TP53-220ENST00000610623 STK35Q8TDR2 534 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 SGK3Q96BR1 496 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 BBS4Q96RK4 519 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 EGLN1Q9GZT9 426 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 TCF7L1Q9HCS4 588 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 MOKQ9UQ07 419 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 PLEKHA6Q9Y2H5 1048 aa10.93□□□□□ -0.66
TP53-220ENST00000610623 EFCAB7A8K855 629 aa10.92□□□□□ -0.66
TP53-220ENST00000610623 C1orf196B1AJZ1 125 aa10.92□□□□□ -0.66
TP53-220ENST00000610623 PAPLNO95428 1278 aa10.92□□□□□ -0.66
TP53-220ENST00000610623 PRNPP04156 253 aa10.92□□□□□ -0.66
TP53-220ENST00000610623 CTSLP07711 333 aa10.92□□□□□ -0.66
TP53-220ENST00000610623 OR2T7P0C7T2 308 aa10.92□□□□□ -0.66
TP53-220ENST00000610623 GKN3PP0CG01 181 aa10.92□□□□□ -0.66
TP53-220ENST00000610623 PTHLHP12272 177 aa10.92□□□□□ -0.66
TP53-220ENST00000610623 NCBP2P52298 156 aaKnown RBP eCLIP10.92□□□□□ -0.66
TP53-220ENST00000610623 AKR1C2P52895 323 aa10.92□□□□□ -0.66
TP53-220ENST00000610623 AKR1C1Q04828 323 aa10.92□□□□□ -0.66
TP53-220ENST00000610623 GAS6Q14393 721 aa10.92□□□□□ -0.66
TP53-220ENST00000610623 IRF4Q15306 451 aa10.92□□□□□ -0.66
TP53-220ENST00000610623 EIF2S3LQ2VIR3 472 aaKnown RBP10.92□□□□□ -0.66
TP53-220ENST00000610623 PRAMEF14Q5SWL7 426 aa10.92□□□□□ -0.66
TP53-220ENST00000610623 TMEM71Q6P5X7 295 aa10.92□□□□□ -0.66
TP53-220ENST00000610623 Q6ZVL8 140 aa10.92□□□□□ -0.66
TP53-220ENST00000610623 ZNF433Q8N7K0 673 aaPredicted RBP10.92□□□□□ -0.66
TP53-220ENST00000610623 OR56A1Q8NGH5 318 aa10.92□□□□□ -0.66
TP53-220ENST00000610623 OR2T27Q8NH04 317 aa10.92□□□□□ -0.66
TP53-220ENST00000610623 RIOK2Q9BVS4 552 aaKnown RBP10.92□□□□□ -0.66
TP53-220ENST00000610623 DPH1Q9BZG8 443 aa10.92□□□□□ -0.66
TP53-220ENST00000610623 COMMD9Q9P000 198 aa10.92□□□□□ -0.66
TP53-220ENST00000610623 UPB1Q9UBR1 384 aa10.92□□□□□ -0.66
TP53-220ENST00000610623 SLC7A7Q9UM01 511 aa10.92□□□□□ -0.66
TP53-220ENST00000610623 HCFC2Q9Y5Z7 792 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms