RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 ANKRD30BLA7E2S9 258 aa13.15□□□□□ -0.31
PCDHB16-201ENST00000609684 SELENOFO60613 162 aa13.15□□□□□ -0.31
PCDHB16-201ENST00000609684 TUBG1P23258 451 aa13.15□□□□□ -0.31
PCDHB16-201ENST00000609684 PLCXD3Q63HM9 321 aa13.15□□□□□ -0.31
PCDHB16-201ENST00000609684 TCTN3Q6NUS6 607 aa13.15□□□□□ -0.31
PCDHB16-201ENST00000609684 FRMD1Q8N878 549 aa13.15□□□□□ -0.31
PCDHB16-201ENST00000609684 ZFPM2Q8WW38 1151 aa13.15□□□□□ -0.31
PCDHB16-201ENST00000609684 VRK1Q99986 396 aaPredicted RBP13.15□□□□□ -0.31
PCDHB16-201ENST00000609684 SPNS1Q9H2V7 528 aa13.15□□□□□ -0.31
PCDHB16-201ENST00000609684 CCDC86Q9H6F5 360 aaKnown RBP13.15□□□□□ -0.31
PCDHB16-201ENST00000609684 ASF1BQ9NVP2 202 aa13.15□□□□□ -0.31
PCDHB16-201ENST00000609684 KLHL13Q9P2N7 655 aa13.15□□□□□ -0.31
PCDHB16-201ENST00000609684 CORINQ9Y5Q5 1042 aa13.15□□□□□ -0.31
PCDHB16-201ENST00000609684 SCN1AP35498 2009 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 UBL3O95164 117 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 ZMAT1Q5H9K5 638 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 MEX3BQ6ZN04 569 aaKnown RBP13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 ZNF695Q8IW36 515 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 TM9SF4Q92544 642 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 ATOH1Q92858 354 aaPredicted RBP13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 ARSGQ96EG1 525 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 MRGPRX1Q96LB2 322 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 CTRCQ99895 268 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 HINT2Q9BX68 163 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 DUSP21Q9H596 190 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 A0A1B0GX78 115 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 PIPP12273 146 aaPredicted RBP13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 ST6GAL1P15907 406 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 HTR2CP28335 458 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 ETV5P41161 510 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 ETV1P50549 477 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 FGL2Q14314 439 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 KCNJ8Q15842 424 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 AGAP7PQ5VUJ5 663 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 PM20D2Q8IYS1 436 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 OR4M1Q8NGD0 313 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 OR2A1Q8NGT9 310 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 C11orf54Q9H0W9 315 aaPredicted RBP13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 BOKQ9UMX3 212 aaPredicted RBP13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 EMC9Q9Y3B6 208 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 IGHV3-20A0A0C4DH32 117 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 C2orf72A6NCS6 295 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 TMX2-CTNND1H3BSU7 103 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 HLA-AP01891 365 aaKnown RBP13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 THBS1P07996 1170 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 METAP1P53582 386 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 SEC61A1P61619 476 aaKnown RBP13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 KCNAB1Q14722 419 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 STK11Q15831 433 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 LYSMD2Q8IV50 215 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 FAM26EQ8N5C1 309 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 ZNF454Q8N9F8 522 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 FNDC9Q8TBE3 224 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 GLYATL2Q8WU03 294 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 PIGCQ92535 297 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 LINC00615Q96LM1 132 aaPredicted RBP13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 TEAD3Q99594 435 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 EMC3Q9P0I2 261 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 TMEM129A0AVI4 362 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 ZAR1LA6NP61 321 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 A8MVM7 634 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 PEX14O75381 377 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 IRF2P14316 349 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 PSMB1P20618 241 aaKnown RBP13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 EPHA1P21709 976 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 SSR4P51571 173 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 PCBD1P61457 104 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 ALKBH1Q13686 389 aaKnown RBP13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 AGBL4Q5VU57 503 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 CD300LGQ6UXG3 332 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 BAHD1Q8TBE0 780 aaPredicted RBP13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 ZNF385DQ9H6B1 395 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 GAREM1Q9H706 876 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 ZNF225Q9UK10 706 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 A3GALT2U3KPV4 340 aa13.14□□□□□ -0.31
PCDHB16-201ENST00000609684 P2RX6O15547 441 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 MRPL33O75394 65 aaKnown RBP13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 CEACAM5P06731 702 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 CHRNB1P11230 501 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 DPP4P27487 766 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 GPR157Q5UAW9 335 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 FOXB2Q5VYV0 432 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 PAQR6Q6TCH4 344 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 ZNF620Q6ZNG0 422 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 Q6ZNX1 250 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 SLC16A14Q7RTX9 510 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 FBXL6Q8N531 539 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 STEAP2Q8NFT2 490 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 NELFAQ9H3P2 528 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 HINT3Q9NQE9 182 aaKnown RBP13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 GLCEO94923 617 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 PRPH2P23942 346 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 HTR5AP47898 357 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 VEGFCP49767 419 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 TMEM196Q5HYL7 178 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 DCAF12Q5T6F0 453 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 SULF2Q8IWU5 870 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 OR6F1Q8NGZ6 308 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 SPIN2AQ99865 258 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 SPIN2BQ9BPZ2 258 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms