RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 MPGP29372 298 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 RPL4P36578 427 aaKnown RBP20.44■□□□□ 0.86
SHANK2-220ENST00000608988 CLDN12P56749 244 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 PRPS1P60891 318 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 LTBQ06643 244 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 MGAT2Q10469 447 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 KIR2DS3Q14952 304 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 NUMA1Q14980 2115 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 TOMM20Q15388 145 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 FBXO42Q6P3S6 717 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 C7orf57Q8NEG2 295 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 OR51L1Q8NGJ5 315 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 OR4C16Q8NGL9 310 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 MRPS24Q96EL2 167 aaKnown RBP20.44■□□□□ 0.86
SHANK2-220ENST00000608988 SCARF2Q96GP6 870 aaPredicted RBP20.44■□□□□ 0.86
SHANK2-220ENST00000608988 OR2A5Q96R48 311 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 C1orf198Q9H425 327 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 SLC17A5Q9NRA2 495 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 UPB1Q9UBR1 384 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 STEAP1Q9UHE8 339 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 SLC6A5Q9Y345 797 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 PLEKHM1Q9Y4G2 1056 aa20.44■□□□□ 0.86
SHANK2-220ENST00000608988 TRBV5-7A0A0A0MS05 114 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 A0A0D9SG52 128 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 SYNDIG1LA6NDD5 238 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 GOSR2O14653 212 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 MTRF1O75570 445 aaKnown RBP20.43■□□□□ 0.86
SHANK2-220ENST00000608988 IGF2P01344 180 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 CSF2RBP32927 897 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 PSMD4P55036 377 aaKnown RBP20.43■□□□□ 0.86
SHANK2-220ENST00000608988 COL9A2Q14055 689 aaPredicted RBP20.43■□□□□ 0.86
SHANK2-220ENST00000608988 FAAP20Q6NZ36 180 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 ANKRD16Q6P6B7 361 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 PXT1Q8NFP0 134 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 OR52B4Q8NGK2 314 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 ZDHHC1Q8WTX9 485 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 HMGB4Q8WW32 186 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 RSC1A1Q92681 617 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 CTHRC1Q96CG8 243 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 RSPRY1Q96DX4 576 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 PTCHD1Q96NR3 888 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 SLC19A3Q9BZV2 496 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 MFFQ9GZY8 342 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 LMAN2LQ9H0V9 348 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 CREBZFQ9NS37 354 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 CDC123O75794 336 aaPredicted RBP20.43■□□□□ 0.86
SHANK2-220ENST00000608988 ADH1BP00325 375 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 APEHP13798 732 aaKnown RBP20.43■□□□□ 0.86
SHANK2-220ENST00000608988 CSRP1P21291 193 aaKnown RBP20.43■□□□□ 0.86
SHANK2-220ENST00000608988 FGL1Q08830 312 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 ZNF169Q14929 603 aaPredicted RBP20.43■□□□□ 0.86
SHANK2-220ENST00000608988 LINC01590Q5TEZ4 76 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 OR7E24Q6IFN5 339 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 SDR16C5Q8N3Y7 309 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 OR6K6Q8NGW6 343 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 ZCCHC10Q8TBK6 192 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 SLC38A3Q99624 504 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 LMF2Q9BU23 707 aaKnown RBP20.43■□□□□ 0.86
SHANK2-220ENST00000608988 ZNF416Q9BWM5 594 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 TWSG1Q9GZX9 223 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 APMAPQ9HDC9 416 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 MYOZ1Q9NP98 299 aaPredicted RBP20.43■□□□□ 0.86
SHANK2-220ENST00000608988 PCDHB16Q9NRJ7 776 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 YBX2Q9Y2T7 364 aaKnown RBP20.43■□□□□ 0.86
SHANK2-220ENST00000608988 INSL6Q9Y581 213 aa20.43■□□□□ 0.86
SHANK2-220ENST00000608988 TBC1D3IA0A087WXS9 549 aa20.42■□□□□ 0.86
SHANK2-220ENST00000608988 OR6C68A6NDL8 312 aa20.42■□□□□ 0.86
SHANK2-220ENST00000608988 EFCAB7A8K855 629 aa20.42■□□□□ 0.86
SHANK2-220ENST00000608988 LGALS8O00214 317 aa20.42■□□□□ 0.86
SHANK2-220ENST00000608988 ANXA2P07355 339 aaKnown RBP20.42■□□□□ 0.86
SHANK2-220ENST00000608988 ADRA2CP18825 462 aa20.42■□□□□ 0.86
SHANK2-220ENST00000608988 EMDP50402 254 aa20.42■□□□□ 0.86
SHANK2-220ENST00000608988 FLI1Q01543 452 aaPredicted RBP20.42■□□□□ 0.86
SHANK2-220ENST00000608988 EIF2B5Q13144 721 aaKnown RBP20.42■□□□□ 0.86
SHANK2-220ENST00000608988 CST6Q15828 149 aa20.42■□□□□ 0.86
SHANK2-220ENST00000608988 ZNF141Q15928 474 aa20.42■□□□□ 0.86
SHANK2-220ENST00000608988 TMEM17Q86X19 198 aa20.42■□□□□ 0.86
SHANK2-220ENST00000608988 CLRN3Q8NCR9 226 aa20.42■□□□□ 0.86
SHANK2-220ENST00000608988 OR4E2Q8NGC2 313 aa20.42■□□□□ 0.86
SHANK2-220ENST00000608988 TNFAIP8L1Q8WVP5 186 aa20.42■□□□□ 0.86
SHANK2-220ENST00000608988 NMNAT3Q96T66 252 aa20.42■□□□□ 0.86
SHANK2-220ENST00000608988 ALG12Q9BV10 488 aa20.42■□□□□ 0.86
SHANK2-220ENST00000608988 MS4A7Q9GZW8 240 aaPredicted RBP20.42■□□□□ 0.86
SHANK2-220ENST00000608988 CCDC86Q9H6F5 360 aaKnown RBP20.42■□□□□ 0.86
SHANK2-220ENST00000608988 POM121CA8CG34 1229 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 H3BUI4 141 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 IMPA2O14732 288 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 FGF17O60258 216 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 ZNF254O75437 659 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 RLN1P04808 185 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 C5AR1P21730 350 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 RPS4XP62701 263 aaKnown RBP20.41■□□□□ 0.86
SHANK2-220ENST00000608988 RPS15P62841 145 aaKnown RBP20.41■□□□□ 0.86
SHANK2-220ENST00000608988 ETFDHQ16134 617 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 C1orf53Q5VUE5 145 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 PM20D2Q8IYS1 436 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 MUC20Q8N307 709 aaPredicted RBP20.41■□□□□ 0.86
SHANK2-220ENST00000608988 PMEPA1Q969W9 287 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 CCDC74AQ96AQ1 378 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 FBXL2Q9UKC9 423 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms