RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 MAPK11Q15759 364 aa12.88□□□□□ -0.35
CTSA-216ENST00000607212 PDCD4Q53EL6 469 aaKnown RBP12.88□□□□□ -0.35
CTSA-216ENST00000607212 MDP1Q86V88 176 aa12.88□□□□□ -0.35
CTSA-216ENST00000607212 PIK3C3Q8NEB9 887 aa12.88□□□□□ -0.35
CTSA-216ENST00000607212 SLC38A4Q969I6 547 aa12.88□□□□□ -0.35
CTSA-216ENST00000607212 KTI12Q96EK9 354 aaPredicted RBP12.88□□□□□ -0.35
CTSA-216ENST00000607212 BOD1Q96IK1 185 aa12.88□□□□□ -0.35
CTSA-216ENST00000607212 OXGR1Q96P68 337 aa12.88□□□□□ -0.35
CTSA-216ENST00000607212 SOX7Q9BT81 388 aa12.88□□□□□ -0.35
CTSA-216ENST00000607212 ZNF442Q9H7R0 627 aa12.88□□□□□ -0.35
CTSA-216ENST00000607212 GPR35Q9HC97 309 aa12.88□□□□□ -0.35
CTSA-216ENST00000607212 SLC6A13Q9NSD5 602 aa12.88□□□□□ -0.35
CTSA-216ENST00000607212 SEC14L4Q9UDX3 406 aa12.88□□□□□ -0.35
CTSA-216ENST00000607212 HAO1Q9UJM8 370 aa12.88□□□□□ -0.35
CTSA-216ENST00000607212 PRDM4Q9UKN5 801 aa12.88□□□□□ -0.35
CTSA-216ENST00000607212 RCE1Q9Y256 329 aa12.88□□□□□ -0.35
CTSA-216ENST00000607212 CMAHPQ9Y471 501 aa12.88□□□□□ -0.35
CTSA-216ENST00000607212 DSPPQ9NZW4 1301 aa12.88□□□□□ -0.35
CTSA-216ENST00000607212 IGHV2OR16-5A0A0B4J2B6 119 aa12.87□□□□□ -0.35
CTSA-216ENST00000607212 TMEM229AB2RXF0 380 aa12.87□□□□□ -0.35
CTSA-216ENST00000607212 M0R082 166 aa12.87□□□□□ -0.35
CTSA-216ENST00000607212 OR2T1O43869 369 aa12.87□□□□□ -0.35
CTSA-216ENST00000607212 IGKV3-15P01624 115 aa12.87□□□□□ -0.35
CTSA-216ENST00000607212 IGLV1-44P01699 117 aa12.87□□□□□ -0.35
CTSA-216ENST00000607212 IL2RGP31785 369 aa12.87□□□□□ -0.35
CTSA-216ENST00000607212 GKAP1Q5VSY0 366 aaPredicted RBP12.87□□□□□ -0.35
CTSA-216ENST00000607212 MYPOPQ86VE0 399 aaPredicted RBP12.87□□□□□ -0.35
CTSA-216ENST00000607212 UEVLDQ8IX04 471 aa12.87□□□□□ -0.35
CTSA-216ENST00000607212 CDK20Q8IZL9 346 aa12.87□□□□□ -0.35
CTSA-216ENST00000607212 RFLNBQ8N5W9 214 aa12.87□□□□□ -0.35
CTSA-216ENST00000607212 C10orf53Q8N6V4 93 aa12.87□□□□□ -0.35
CTSA-216ENST00000607212 ZNF417Q8TAU3 575 aa12.87□□□□□ -0.35
CTSA-216ENST00000607212 ZNF587Q96SQ5 575 aaPredicted RBP12.87□□□□□ -0.35
CTSA-216ENST00000607212 NELFAQ9H3P2 528 aa12.87□□□□□ -0.35
CTSA-216ENST00000607212 RAD21L1Q9H4I0 556 aa12.87□□□□□ -0.35
CTSA-216ENST00000607212 OCEL1Q9H607 264 aa12.87□□□□□ -0.35
CTSA-216ENST00000607212 NARFLQ9H6Q4 476 aa12.87□□□□□ -0.35
CTSA-216ENST00000607212 B3GAT2Q9NPZ5 323 aa12.87□□□□□ -0.35
CTSA-216ENST00000607212 THAP1Q9NVV9 213 aa12.87□□□□□ -0.35
CTSA-216ENST00000607212 SLC13A4Q9UKG4 626 aa12.87□□□□□ -0.35
CTSA-216ENST00000607212 POFUT2Q9Y2G5 429 aa12.87□□□□□ -0.35
CTSA-216ENST00000607212 SPEF1Q9Y4P9 236 aa12.87□□□□□ -0.35
CTSA-216ENST00000607212 LYNX1G3V0Z9 82 aa12.86□□□□□ -0.35
CTSA-216ENST00000607212 SERPINI2O75830 405 aa12.86□□□□□ -0.35
CTSA-216ENST00000607212 LYNX1P0DP58 116 aa12.86□□□□□ -0.35
CTSA-216ENST00000607212 PCMT1P22061 227 aa12.86□□□□□ -0.35
CTSA-216ENST00000607212 GRPRP30550 384 aa12.86□□□□□ -0.35
CTSA-216ENST00000607212 POLR2JP52435 117 aaKnown RBP12.86□□□□□ -0.35
CTSA-216ENST00000607212 GALK2Q01415 458 aa12.86□□□□□ -0.35
CTSA-216ENST00000607212 PIGFQ07326 219 aa12.86□□□□□ -0.35
CTSA-216ENST00000607212 TRIP10Q15642 601 aa12.86□□□□□ -0.35
CTSA-216ENST00000607212 TRMT5Q32P41 509 aaKnown RBP12.86□□□□□ -0.35
CTSA-216ENST00000607212 UGT2A3Q6UWM9 527 aa12.86□□□□□ -0.35
CTSA-216ENST00000607212 C12orf54Q6X4T0 127 aa12.86□□□□□ -0.35
CTSA-216ENST00000607212 ZNF786Q8N393 782 aa12.86□□□□□ -0.35
CTSA-216ENST00000607212 FAM169BQ8N8A8 192 aa12.86□□□□□ -0.35
CTSA-216ENST00000607212 IL17RDQ8NFM7 739 aa12.86□□□□□ -0.35
CTSA-216ENST00000607212 BBS10Q8TAM1 723 aa12.86□□□□□ -0.35
CTSA-216ENST00000607212 HPS1Q92902 700 aa12.86□□□□□ -0.35
CTSA-216ENST00000607212 MAL2Q969L2 176 aa12.86□□□□□ -0.35
CTSA-216ENST00000607212 DOK1Q99704 481 aa12.86□□□□□ -0.35
CTSA-216ENST00000607212 PTDSS2Q9BVG9 487 aa12.86□□□□□ -0.35
CTSA-216ENST00000607212 NOX3Q9HBY0 568 aa12.86□□□□□ -0.35
CTSA-216ENST00000607212 ZNF99A8MXY4 864 aaPredicted RBP12.85□□□□□ -0.35
CTSA-216ENST00000607212 FTCDNL1E5RQL4 147 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 SLCO1B7G3V0H7 640 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 RPL36A-HNRNPH2H7BZ11 118 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 UBDO15205 165 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 NPIPB7O75200 414 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 HLA-HP01893 362 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 NUDT7P0C024 238 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 ITGA2P17301 1181 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 TCN1P20061 433 aaPredicted RBP12.85□□□□□ -0.35
CTSA-216ENST00000607212 GIFP27352 417 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 LSP1P33241 339 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 MVDP53602 400 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 MPP2Q14168 576 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 GSG1Q2KHT4 349 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 ALG10BQ5I7T1 473 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 FAM69AQ5T7M9 428 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 WDR93Q6P2C0 686 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 SHQ1Q6PI26 577 aaKnown RBP12.85□□□□□ -0.35
CTSA-216ENST00000607212 C5orf46Q6UWT4 87 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 ZNF813Q6ZN06 617 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 H1FNTQ75WM6 255 aaPredicted RBP12.85□□□□□ -0.35
CTSA-216ENST00000607212 CCDC36Q8IYA8 594 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 MIER2Q8N344 545 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 MREGQ8N565 214 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 OR6N1Q8NGY5 312 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 VPS33AQ96AX1 596 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 ZNF837Q96EG3 531 aaPredicted RBP12.85□□□□□ -0.35
CTSA-216ENST00000607212 C1orf159Q96HA4 380 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 OR2M2Q96R28 347 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 SYT3Q9BQG1 590 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 EMC6Q9BV81 110 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 ASPNQ9BXN1 380 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 LPAR2Q9HBW0 351 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 ZIM2Q9NZV7 527 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 REV1Q9UBZ9 1251 aa12.85□□□□□ -0.35
CTSA-216ENST00000607212 METRNQ9UJH8 293 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms