RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 ZNF677Q86XU0 584 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 CDKL3Q8IVW4 592 aaPredicted RBP3.96□□□□□ -1.78
LINC00397-202ENST00000606785 ZNF440Q8IYI8 595 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 TTLQ8NG68 377 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 PAQR8Q8TEZ7 354 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 CIDECQ96AQ7 238 aaPredicted RBP3.96□□□□□ -1.78
LINC00397-202ENST00000606785 MCUR1Q96AQ8 359 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 ZNF689Q96CS4 500 aaPredicted RBP3.96□□□□□ -1.78
LINC00397-202ENST00000606785 TM4SF19Q96DZ7 209 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 ZNF599Q96NL3 588 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 TBX15Q96SF7 602 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 TSC22D3Q99576 134 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 VGLL1Q99990 258 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 RBM4BQ9BQ04 359 aaKnown RBP3.96□□□□□ -1.78
LINC00397-202ENST00000606785 FRMD8P1Q9BZ68 369 aaPredicted RBP3.96□□□□□ -1.78
LINC00397-202ENST00000606785 TRIM15Q9C019 465 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 NDEL1Q9GZM8 345 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 GBA3Q9H227 469 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 TPK1Q9H3S4 243 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 REEP4Q9H6H4 257 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 NIPAL2Q9H841 368 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 MIEF1Q9NQG6 463 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 CUTCQ9NTM9 273 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 CLEC5AQ9NY25 188 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 ZNF581Q9P0T4 197 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 PSMC3IPQ9P2W1 217 aaPredicted RBP3.96□□□□□ -1.78
LINC00397-202ENST00000606785 FADS3Q9Y5Q0 445 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 SCAPERQ9BY12 1400 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 PCNX3Q9H6A9 2034 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 TCRBV9S1A1TA0A576 114 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 CCDC182A6NF36 153 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 GOLGA8KD6RF30 607 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 PRR23D1E9PI22 279 aaPredicted RBP3.95□□□□□ -1.78
LINC00397-202ENST00000606785 WRBO00258 174 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 RRP8O43159 456 aaKnown RBP3.95□□□□□ -1.78
LINC00397-202ENST00000606785 MYO1DO94832 1006 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 LALBAP00709 142 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 KRT6AP02538 564 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 SLC35E2P0CK97 266 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 STAG3L3P0CL85 134 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 PRR23D2P0DMB1 279 aaPredicted RBP3.95□□□□□ -1.78
LINC00397-202ENST00000606785 HOXB8P17481 243 aaPredicted RBP3.95□□□□□ -1.78
LINC00397-202ENST00000606785 RRM2P31350 389 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 IL2RGP31785 369 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 PKNOX1P55347 436 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 PSMC5P62195 406 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 SLC10A7Q0GE19 358 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 SCRN3Q0VDG4 424 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 XRCC4Q13426 336 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 RUNX3Q13761 415 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 CHRNA6Q15825 494 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 ZNF77Q15935 545 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 MICBQ29980 383 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 ISXQ2M1V0 245 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 SLC22A6Q4U2R8 563 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 SAPCD1Q5SSQ6 148 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 THEM4Q5T1C6 240 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 OR5M10Q6IEU7 315 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 ZNF497Q6ZNH5 498 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 C3orf62Q6ZUJ4 267 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 BZW1Q7L1Q6 419 aaKnown RBP3.95□□□□□ -1.78
LINC00397-202ENST00000606785 TMCO2Q7Z6W1 182 aaPredicted RBP3.95□□□□□ -1.78
LINC00397-202ENST00000606785 CCDC112Q8NEF3 446 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 OR52H1Q8NGJ2 320 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 OR10Z1Q8NGY1 313 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 OR56B4Q8NH76 319 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 PDCD6IPQ8WUM4 868 aaKnown RBP3.95□□□□□ -1.78
LINC00397-202ENST00000606785 ZNF641Q96N77 438 aaPredicted RBP3.95□□□□□ -1.78
LINC00397-202ENST00000606785 CCT8L2Q96SF2 557 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 CNN2Q99439 309 aaKnown RBP3.95□□□□□ -1.78
LINC00397-202ENST00000606785 MAPKAP1Q9BPZ7 522 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 CENPKQ9BS16 269 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 CHIAQ9BZP6 476 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 PPA2Q9H2U2 334 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.95□□□□□ -1.78
LINC00397-202ENST00000606785 PLLPQ9Y342 182 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 CACNG2Q9Y698 323 aa3.95□□□□□ -1.78
LINC00397-202ENST00000606785 TMEM210A6NLX4 147 aa3.94□□□□□ -1.78
LINC00397-202ENST00000606785 DHRS7CA6NNS2 312 aa3.94□□□□□ -1.78
LINC00397-202ENST00000606785 SYCE1LA8MT33 242 aa3.94□□□□□ -1.78
LINC00397-202ENST00000606785 C9JVG2 144 aa3.94□□□□□ -1.78
LINC00397-202ENST00000606785 CDX4O14627 284 aaPredicted RBP3.94□□□□□ -1.78
LINC00397-202ENST00000606785 DFNA5O60443 496 aa3.94□□□□□ -1.78
LINC00397-202ENST00000606785 PFDN1O60925 122 aa3.94□□□□□ -1.78
LINC00397-202ENST00000606785 CDH16O75309 829 aa3.94□□□□□ -1.78
LINC00397-202ENST00000606785 TMEM50AO95807 157 aa3.94□□□□□ -1.78
LINC00397-202ENST00000606785 IL6P05231 212 aa3.94□□□□□ -1.78
LINC00397-202ENST00000606785 STSP08842 583 aa3.94□□□□□ -1.78
LINC00397-202ENST00000606785 PGAM2P15259 253 aa3.94□□□□□ -1.78
LINC00397-202ENST00000606785 HMOX2P30519 316 aa3.94□□□□□ -1.78
LINC00397-202ENST00000606785 PTGDSP41222 190 aa3.94□□□□□ -1.78
LINC00397-202ENST00000606785 KIR2DS2P43631 304 aa3.94□□□□□ -1.78
LINC00397-202ENST00000606785 CDH6P55285 790 aa3.94□□□□□ -1.78
LINC00397-202ENST00000606785 LMO4P61968 165 aa3.94□□□□□ -1.78
LINC00397-202ENST00000606785 CHRNB3Q05901 458 aa3.94□□□□□ -1.78
LINC00397-202ENST00000606785 PPIL2Q13356 520 aa3.94□□□□□ -1.78
LINC00397-202ENST00000606785 QRICH1Q2TAL8 776 aa3.94□□□□□ -1.78
LINC00397-202ENST00000606785 EIPR1Q53HC9 387 aa3.94□□□□□ -1.78
LINC00397-202ENST00000606785 CARD16Q5EG05 197 aa3.94□□□□□ -1.78
LINC00397-202ENST00000606785 C2orf66Q6UXQ4 117 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms