RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 SMARCD2Q92925 531 aa5.31□□□□□ -1.56
COL4A3BP-207ENST00000604926 EMG1Q92979 244 aaKnown RBP5.31□□□□□ -1.56
COL4A3BP-207ENST00000604926 SLC25A28Q96A46 364 aa5.31□□□□□ -1.56
COL4A3BP-207ENST00000604926 WDR34Q96EX3 536 aa5.31□□□□□ -1.56
COL4A3BP-207ENST00000604926 CAPNS2Q96L46 248 aa5.31□□□□□ -1.56
COL4A3BP-207ENST00000604926 C12orf42Q96LP6 360 aa5.31□□□□□ -1.56
COL4A3BP-207ENST00000604926 COL25A1Q9BXS0 654 aaPredicted RBP5.31□□□□□ -1.56
COL4A3BP-207ENST00000604926 LMAN1LQ9HAT1 526 aa5.31□□□□□ -1.56
COL4A3BP-207ENST00000604926 CACYBPQ9HB71 228 aaKnown RBP5.31□□□□□ -1.56
COL4A3BP-207ENST00000604926 Q9N2K0 584 aa5.31□□□□□ -1.56
COL4A3BP-207ENST00000604926 NLE1Q9NVX2 485 aaPredicted RBP5.31□□□□□ -1.56
COL4A3BP-207ENST00000604926 BABAM1Q9NWV8 329 aa5.31□□□□□ -1.56
COL4A3BP-207ENST00000604926 MTMR10Q9NXD2 777 aa5.31□□□□□ -1.56
COL4A3BP-207ENST00000604926 ZNF391Q9UJN7 358 aa5.31□□□□□ -1.56
COL4A3BP-207ENST00000604926 VPREB3Q9UKI3 123 aa5.31□□□□□ -1.56
COL4A3BP-207ENST00000604926 A0A1W2PR48 441 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 SMCO3A2RU48 225 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 E5RGE8 158 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 NPIPA5E9PKD4 350 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 NPIPA3F8WFD2 350 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 H3BNH8 94 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 CYB561D2O14569 222 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 COPEO14579 308 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 HAPLN1P10915 354 aaPredicted RBP5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 CSF2RBP32927 897 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 IRX4P78413 519 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 AIMP2Q13155 320 aaKnown RBP5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 FOXE3Q13461 319 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 ZNF235Q14590 738 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 ZNF181Q2M3W8 571 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 EIPR1Q53HC9 387 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 KHDC1LQ5JSQ8 128 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 ELFN2Q5R3F8 820 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 GPRC6AQ5T6X5 926 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 NSUN5P2Q63ZY6 315 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 NAPRTQ6XQN6 538 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 TMEM179Q6ZVK1 233 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 C11orf42Q8N5U0 333 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 METTL13Q8N6R0 699 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 LRRC52Q8N7C0 313 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 OR14A16Q8NHC5 309 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 MAFAQ8NHW3 353 aaPredicted RBP5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 HOXB13Q92826 284 aaPredicted RBP5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 WDR89Q96FK6 387 aaPredicted RBP5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 CELF6Q96J87 481 aaKnown RBP5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 GPR137Q96N19 417 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 RAB34Q9BZG1 259 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 WWTR1Q9GZV5 400 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 CHST8Q9H2A9 424 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 SEC31BQ9NQW1 1179 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 SLC17A6Q9P2U8 582 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 NAGPAQ9UK23 515 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 NPIPA1Q9UND3 350 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 YLPM1P49750 1951 aaKnown RBP5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 AQP7P3A6NL99 342 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 G3V3Y1 287 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 GPR75O95800 540 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 GAPDHP04406 335 aaKnown RBP5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 ARL4AP40617 200 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 ECI1P42126 302 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 CAMPP49913 170 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 RAB5CP51148 216 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 RAB7AP51149 207 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 CLDN12P56749 244 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 CDC42P60953 191 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 EVX2Q03828 476 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 PYCR3Q53H96 274 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 TMEM198Q66K66 360 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 KIRREL2Q6UWL6 708 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 C16orf89Q6UX73 402 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 RNF111Q6ZNA4 994 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 TMPPEQ6ZT21 453 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 DPY19L4Q7Z388 723 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 VRK3Q8IV63 474 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 PACRGLQ8N7B6 248 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 OR4P4Q8NGL7 312 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 RXFP4Q8TDU9 374 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 SAP25Q8TEE9 199 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 TLCD1Q96CP7 247 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 ASPNQ9BXN1 380 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 NAA50Q9GZZ1 169 aaKnown RBP5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 OR14J1Q9UGF5 321 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 KIF25Q9UIL4 384 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 YIPF1Q9Y548 306 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 ADGRA3Q8IWK6 1321 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 A0A1W2PR77 199 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 TMEM89A2RUT3 159 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 FAM90A7PA6NKC0 464 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 FAM90A22PA8MWA6 464 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 FAM90A12PA8MX19 464 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 FAM90A23PA8MXZ1 464 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 MAN2B1O00754 1011 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 PRICKLE3O43900 615 aaPredicted RBP5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 RDH16O75452 317 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 IGHV2-5P01817 119 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 BMP4P12644 408 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 MAKP20794 623 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 SLC6A4P31645 630 aa5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 EMX1Q04741 257 aaPredicted RBP5.3□□□□□ -1.56
COL4A3BP-207ENST00000604926 MTFR1Q15390 333 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms