RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 C19orf35Q6ZS72 473 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 MRPL21Q7Z2W9 205 aaKnown RBP3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 HSD11B1LQ7Z5J1 315 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 PIGZQ86VD9 579 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 MMAAQ8IVH4 418 aaKnown RBP3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 KIRREL3Q8IZU9 778 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 ZNF383Q8NA42 475 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 OR51L1Q8NGJ5 315 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 CCDC12Q8WUD4 166 aaPredicted RBP3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 NUDCD2Q8WVJ2 157 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 C17orf50Q8WW18 174 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 CACNG8Q8WXS5 425 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 C8orf44Q96CB5 159 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 NUS1Q96E22 293 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 OMA1Q96E52 524 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 OVOL2Q9BRP0 275 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 NIPSNAP3BQ9BS92 247 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 MCRIP2Q9BUT9 160 aaKnown RBP3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 RBM4Q9BWF3 364 aaKnown RBP3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 RACGAP1Q9H0H5 632 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 NXF5Q9H1B4 397 aaKnown RBP3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 NEUROG2Q9H2A3 272 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 OR52A5Q9H2C5 316 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 C3orf14Q9HBI5 128 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 CCNB1IP1Q9NPC3 277 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 MAN2C1Q9NTJ4 1040 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 ZDHHC18Q9NUE0 388 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 ELOVL5Q9NYP7 299 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 CHMP5Q9NZZ3 219 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 STAP1Q9ULZ2 295 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 NDRG2Q9UN36 371 aaKnown RBP3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 VDAC3Q9Y277 283 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 PEX16Q9Y5Y5 336 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 MAD1L1Q9Y6D9 718 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 TICRRQ7Z2Z1 1910 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 THADAQ6YHU6 1953 aa3.32□□□□□ -1.88
IGHV3-29-201ENST00000604817 GOLGA4Q13439 2230 aaKnown RBP3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 EML5Q05BV3 1969 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 PDCD11Q14690 1871 aaKnown RBP3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 IGLV5-37A0A075B6J1 123 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 KCNE1BA0A087WTH5 132 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 A0A1B0GUS0 222 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 hCG_38984A0A1B0GV85 526 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 CCT8L1PA6NM43 557 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 CYSRT1A8MQ03 144 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 PDZK1P1A8MUH7 402 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 A8MXQ7 604 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 H3BQV1 296 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 CYTH3O43739 400 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 CDK14O94921 469 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 DEXIO95424 95 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 IGHV4-39P01824 125 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 IGHG4P01861 327 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 P04436 131 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 GPIP06744 558 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 TPM3P06753 285 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 HBQ1P09105 142 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 ZNF12P17014 697 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 OXTRP30559 389 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 YWHABP31946 246 aaKnown RBP3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 SAA4P35542 130 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 GLUD2P49448 558 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 ARHGDIAP52565 204 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 CLDN18P56856 261 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 IL9RQ01113 521 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 RGS1Q08116 209 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 STK38Q15208 465 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 CCDC6Q16204 474 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 RFTN2Q52LD8 501 aaPredicted RBP3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 HSP90AA4PQ58FG1 418 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 PPM1LQ5SGD2 360 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 LY6G6FQ5SQ64 297 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 AP1ARQ63HQ0 302 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 SPECC1LQ69YQ0 1117 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 OR52W1Q6IF63 320 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 CATSPERDQ86XM0 798 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 CCDC50Q8IVM0 306 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 SLC22A15Q8IZD6 547 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 ST13P4Q8IZP2 240 aaPredicted RBP3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 ZNF441Q8N8Z8 693 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 C8orf31Q8N9H6 132 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 GATSQ8NAP1 163 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 CATSPER1Q8NEC5 780 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 KBTBD8Q8NFY9 601 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 OR4F6Q8NGB9 312 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 ITFG1Q8TB96 612 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 FBXO25Q8TCJ0 367 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 NR4A3Q92570 626 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 UBE2E3Q969T4 207 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 ELSPBP1Q96BH3 223 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 ZNF778Q96MU6 729 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 MBOAT7Q96N66 472 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 CYTH2Q99418 400 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 TMEM246Q9BRR3 403 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 GPR174Q9BXC1 333 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 SPZ1Q9BXG8 430 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 PLA2G2FQ9BZM2 168 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 MFFQ9GZY8 342 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms