RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 ALG2Q9H553 416 aa10.15□□□□□ -0.78
CCDC12-209ENST00000604164 SPAG4Q9NPE6 437 aa10.15□□□□□ -0.78
CCDC12-209ENST00000604164 CMTM6Q9NX76 183 aa10.15□□□□□ -0.78
CCDC12-209ENST00000604164 B3GAT1Q9P2W7 334 aa10.15□□□□□ -0.78
CCDC12-209ENST00000604164 ZNF229Q9UJW7 825 aa10.15□□□□□ -0.78
CCDC12-209ENST00000604164 ARL2BPQ9Y2Y0 163 aa10.15□□□□□ -0.78
CCDC12-209ENST00000604164 POLQO75417 2590 aa10.15□□□□□ -0.79
CCDC12-209ENST00000604164 CCDC168Q8NDH2 2452 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 FREM1Q5H8C1 2179 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 DPRXA6NFQ7 191 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 ZNF726A6NNF4 738 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 RPL36A-HNRNPH2H7BZ11 118 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 PLPP3O14495 311 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 ABCD4O14678 606 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 ZNF432O94892 652 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 ADORA3P0DMS8 318 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 CD99P14209 185 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 CDH2P19022 906 aaPredicted RBP10.14□□□□□ -0.79
CCDC12-209ENST00000604164 CBLP22681 906 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 AHCYP23526 432 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 SLC7A2P52569 658 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 CRYBA2P53672 197 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 RPS4XP62701 263 aaKnown RBP10.14□□□□□ -0.79
CCDC12-209ENST00000604164 ROR2Q01974 943 aaKnown RBP10.14□□□□□ -0.79
CCDC12-209ENST00000604164 POU3F1Q03052 451 aaPredicted RBP10.14□□□□□ -0.79
CCDC12-209ENST00000604164 ST3GAL3Q11203 375 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 ZNF74Q16587 644 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 C9orf135Q5VTT2 229 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 SEZ6L2Q6UXD5 910 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 HDDC2Q7Z4H3 204 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 RBM45Q8IUH3 476 aaKnown RBP10.14□□□□□ -0.79
CCDC12-209ENST00000604164 KDM8Q8N371 416 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 OR4D11Q8NGI4 311 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 GEMIN6Q8WXD5 167 aaKnown RBP10.14□□□□□ -0.79
CCDC12-209ENST00000604164 ADAD1Q96M93 576 aaKnown RBP10.14□□□□□ -0.79
CCDC12-209ENST00000604164 MOGAT1Q96PD6 335 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 ALKBH3Q96Q83 286 aaPredicted RBP10.14□□□□□ -0.79
CCDC12-209ENST00000604164 LRRC37BQ96QE4 947 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 KCTD14Q9BQ13 255 aaPredicted RBP10.14□□□□□ -0.79
CCDC12-209ENST00000604164 KCNS3Q9BQ31 491 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 ZNF426Q9BUY5 554 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 GSX2Q9BZM3 304 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 NDE1Q9NXR1 346 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 RIMS3Q9UJD0 308 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 POU2F3Q9UKI9 436 aa10.14□□□□□ -0.79
CCDC12-209ENST00000604164 OTOGQ6ZRI0 2925 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 CSMD2Q7Z408 3487 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 ARPC4-TTLL3A0A0A6YYG9 625 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 MS4A18H0YCH9 400 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 M0R1B8 84 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 CXCR6O00574 342 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 TRAF3IP2O43734 574 aaPredicted RBP10.13□□□□□ -0.79
CCDC12-209ENST00000604164 CH25HO95992 272 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 PLAUP00749 431 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 MT-ND1P03886 318 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 IFNW1P05000 195 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 UMPSP11172 480 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 FOSL1P15407 271 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 PAX1P15863 534 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 CD40P25942 277 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 ZNF83P51522 516 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 MNAT1P51948 309 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 CDH11P55287 796 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 ADAM8P78325 824 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 ZP4Q12836 540 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 MS4A18Q3C1V0 323 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 C3orf36Q3SXR2 165 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 C8orf82Q6P1X6 216 aaPredicted RBP10.13□□□□□ -0.79
CCDC12-209ENST00000604164 SLC22A25Q6T423 547 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 FKBP9P1Q75LS8 142 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 CYP4Z1Q86W10 505 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 TREML1Q86YW5 311 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 PIAS4Q8N2W9 510 aaPredicted RBP10.13□□□□□ -0.79
CCDC12-209ENST00000604164 WDR31Q8NA23 367 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 OR1K1Q8NGR3 316 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 SMAP2Q8WU79 429 aaPredicted RBP10.13□□□□□ -0.79
CCDC12-209ENST00000604164 GTPBP3Q969Y2 492 aaKnown RBP10.13□□□□□ -0.79
CCDC12-209ENST00000604164 TRMT61AQ96FX7 289 aaKnown RBP10.13□□□□□ -0.79
CCDC12-209ENST00000604164 PRRC1Q96M27 445 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 OR2M2Q96R28 347 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 CISD1Q9NZ45 108 aaKnown RBP10.13□□□□□ -0.79
CCDC12-209ENST00000604164 STX18Q9P2W9 335 aaKnown RBP10.13□□□□□ -0.79
CCDC12-209ENST00000604164 SEC14L4Q9UDX3 406 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 RPS6KA6Q9UK32 745 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 MED31Q9Y3C7 131 aa10.13□□□□□ -0.79
CCDC12-209ENST00000604164 KPNA4O00629 521 aaPredicted RBP10.12□□□□□ -0.79
CCDC12-209ENST00000604164 NME4O00746 187 aa10.12□□□□□ -0.79
CCDC12-209ENST00000604164 RNF13O43567 381 aa10.12□□□□□ -0.79
CCDC12-209ENST00000604164 UPK3AO75631 287 aa10.12□□□□□ -0.79
CCDC12-209ENST00000604164 LYPD3O95274 346 aa10.12□□□□□ -0.79
CCDC12-209ENST00000604164 ZNF682O95780 498 aa10.12□□□□□ -0.79
CCDC12-209ENST00000604164 BMP4P12644 408 aa10.12□□□□□ -0.79
CCDC12-209ENST00000604164 OR1E2P47887 323 aa10.12□□□□□ -0.79
CCDC12-209ENST00000604164 GSK3BP49841 420 aa10.12□□□□□ -0.79
CCDC12-209ENST00000604164 FOXG1P55316 489 aaPredicted RBP10.12□□□□□ -0.79
CCDC12-209ENST00000604164 PSME3P61289 254 aa10.12□□□□□ -0.79
CCDC12-209ENST00000604164 LTBQ06643 244 aa10.12□□□□□ -0.79
CCDC12-209ENST00000604164 ETFDHQ16134 617 aa10.12□□□□□ -0.79
CCDC12-209ENST00000604164 TBRG1Q3YBR2 411 aa10.12□□□□□ -0.79
CCDC12-209ENST00000604164 IFI44LQ53G44 452 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms