RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 ZNF160Q9HCG1 818 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 PCNX1Q96RV3 2341 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 OR5K4A6NMS3 321 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 HEPACAM2A8MVW5 462 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 B4DXG7 233 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 PMP2P02689 132 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 IGFBP1P08833 259 aaPredicted RBP8.1□□□□□ -1.11
CSMD1-216ENST00000602557 HOXC8P31273 242 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 HTR3AP46098 478 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 ELLP55199 621 aaPredicted RBP8.1□□□□□ -1.11
CSMD1-216ENST00000602557 RPS18P62269 152 aaKnown RBP8.1□□□□□ -1.11
CSMD1-216ENST00000602557 LRRTM1Q86UE6 522 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 CD200R1Q8TD46 325 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 HAVCR2Q8TDQ0 301 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 FAM96BQ9Y3D0 163 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 CSAG2Q9Y5P2 127 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 OR2T1O43869 369 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 SFXN4Q6P4A7 337 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 AKR1E2Q96JD6 320 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 MTHFD2LQ9H903 347 aaPredicted RBP8.1□□□□□ -1.11
CSMD1-216ENST00000602557 SPTAN1Q13813 2472 aaKnown RBP8.1□□□□□ -1.11
CSMD1-216ENST00000602557 BTAF1O14981 1849 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 TRBV4-1A0A0J9YWV2 114 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 HLA-DOBP13765 273 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 POLR2HP52434 150 aaKnown RBP8.1□□□□□ -1.11
CSMD1-216ENST00000602557 DGCR2P98153 550 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 GLO1Q04760 184 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 GPR119Q8TDV5 335 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 SLC25A31Q9H0C2 315 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 LIN7BQ9HAP6 207 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 TRAV27A0A087WT01 109 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 hCG_1809904A0A1W2PP81 198 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 A0A1W2PR64 198 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 A0A1W2PRV1 198 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 J3QR89 54 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 MSTNO14793 375 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 SYPP08247 313 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 USF1P22415 310 aaPredicted RBP8.1□□□□□ -1.11
CSMD1-216ENST00000602557 PTBP1P26599 531 aaKnown RBP eCLIP8.1□□□□□ -1.112e-7■■■□□ 17
CSMD1-216ENST00000602557 ZNF789Q5FWF6 425 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 L3MBTL4Q8NA19 623 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 REEP6Q96HR9 211 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 ACPTQ9BZG2 426 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 EGLN3Q9H6Z9 239 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 LCATP04180 440 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 HHEXQ03014 270 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 C6orf132Q5T0Z8 1188 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 CYB5R2Q6BCY4 276 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 RNF128Q8TEB7 428 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 SPIN2AQ99865 258 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 SPIN2BQ9BPZ2 258 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 SLC2A11Q9BYW1 496 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 VSX1Q9NZR4 365 aaPredicted RBP8.1□□□□□ -1.11
CSMD1-216ENST00000602557 RARRES3Q9UL19 164 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 ZNF28P17035 718 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 ZNF43P17038 809 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 SNCAP37840 140 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 RPS19P39019 145 aaKnown RBP8.1□□□□□ -1.11
CSMD1-216ENST00000602557 PRPS1P60891 318 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 ZNF252P-AS1Q0IIN9 211 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 TEX261Q6UWH6 196 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 TMEM182Q6ZP80 229 aaPredicted RBP8.1□□□□□ -1.11
CSMD1-216ENST00000602557 DYRK2Q92630 601 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 MS4A7Q9GZW8 240 aaPredicted RBP8.1□□□□□ -1.11
CSMD1-216ENST00000602557 U3KQ87 197 aa8.1□□□□□ -1.11
CSMD1-216ENST00000602557 NFKBIEO00221 500 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 SCG5P05408 212 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 CD79AP11912 226 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 CSF2RAP15509 400 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 CD68P34810 354 aaPredicted RBP8.09□□□□□ -1.11
CSMD1-216ENST00000602557 FAM160A2Q8N612 972 aaPredicted RBP8.09□□□□□ -1.11
CSMD1-216ENST00000602557 OR6S1Q8NH40 331 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 SFT2D1Q8WV19 159 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 GCDHQ92947 438 aaPredicted RBP8.09□□□□□ -1.11
CSMD1-216ENST00000602557 ATF6BQ99941 703 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 FAM173AQ9BQD7 235 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 PTDSS2Q9BVG9 487 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 CDH20Q9HBT6 801 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 ZNF586Q9NXT0 402 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 ZIC2O95409 532 aaPredicted RBP8.09□□□□□ -1.11
CSMD1-216ENST00000602557 ZNF26P17031 533 aaPredicted RBP8.09□□□□□ -1.11
CSMD1-216ENST00000602557 GABRB1P18505 474 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 BTG1P62324 171 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 MOGAT2Q3SYC2 334 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 RHOUQ7L0Q8 258 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 FAM183AA6NL82 134 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 JUNBP17275 347 aaPredicted RBP8.09□□□□□ -1.11
CSMD1-216ENST00000602557 ERVK-16P61578 105 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 ARHGAP19Q14CB8 494 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 TRIM61Q5EBN2 209 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 FIGLAQ6QHK4 219 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 FBXW12Q6X9E4 464 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 PRSS42Q7Z5A4 293 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 TMEM43Q9BTV4 400 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 GSTO2Q9H4Y5 243 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 PELI2Q9HAT8 420 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 CHST11Q9NPF2 352 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 IL26Q9NPH9 171 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 PSORS1C1Q9UIG5 152 aa8.09□□□□□ -1.11
CSMD1-216ENST00000602557 TIAM2Q8IVF5 1701 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms