RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 F13BP05160 661 aa16.63■□□□□ 0.25
SSBP4-212ENST00000601919 ZNF3P17036 446 aa16.63■□□□□ 0.25
SSBP4-212ENST00000601919 SDHAP31040 664 aa16.63■□□□□ 0.25
SSBP4-212ENST00000601919 ISL1P61371 349 aa16.63■□□□□ 0.25
SSBP4-212ENST00000601919 SNRPGP62308 76 aaKnown RBP16.63■□□□□ 0.25
SSBP4-212ENST00000601919 ERVK-25P63136 954 aa16.63■□□□□ 0.25
SSBP4-212ENST00000601919 C1DQ13901 141 aaKnown RBP16.63■□□□□ 0.25
SSBP4-212ENST00000601919 SF3B4Q15427 424 aaKnown RBP eCLIP16.63■□□□□ 0.254e-9■■■■■ 43
SSBP4-212ENST00000601919 FAM205BPQ63HN1 556 aa16.63■□□□□ 0.25
SSBP4-212ENST00000601919 HDDC2Q7Z4H3 204 aa16.63■□□□□ 0.25
SSBP4-212ENST00000601919 IGFN1Q86VF2 1251 aa16.63■□□□□ 0.25
SSBP4-212ENST00000601919 Q8NA96 180 aa16.63■□□□□ 0.25
SSBP4-212ENST00000601919 WDYHV1Q96HA8 205 aa16.63■□□□□ 0.25
SSBP4-212ENST00000601919 Q96MT0 163 aa16.63■□□□□ 0.25
SSBP4-212ENST00000601919 SF3B5Q9BWJ5 86 aaKnown RBP16.63■□□□□ 0.25
SSBP4-212ENST00000601919 SRXN1Q9BYN0 137 aa16.63■□□□□ 0.25
SSBP4-212ENST00000601919 TXNIPQ9H3M7 391 aa16.63■□□□□ 0.25
SSBP4-212ENST00000601919 CMC2Q9NRP2 79 aa16.63■□□□□ 0.25
SSBP4-212ENST00000601919 PNPLA3Q9NST1 481 aa16.63■□□□□ 0.25
SSBP4-212ENST00000601919 SEC14L4Q9UDX3 406 aa16.63■□□□□ 0.25
SSBP4-212ENST00000601919 CAMK2AQ9UQM7 478 aa16.63■□□□□ 0.25
SSBP4-212ENST00000601919 LOC400499M0QZD8 3231 aa16.63■□□□□ 0.25
SSBP4-212ENST00000601919 MGAQ8IWI9 3026 aa16.62■□□□□ 0.25
SSBP4-212ENST00000601919 CFAP47Q6ZTR5 3102 aa16.62■□□□□ 0.25
SSBP4-212ENST00000601919 H0YC42 278 aa16.62■□□□□ 0.25
SSBP4-212ENST00000601919 SURF4O15260 269 aa16.62■□□□□ 0.25
SSBP4-212ENST00000601919 TXNDC12O95881 172 aa16.62■□□□□ 0.25
SSBP4-212ENST00000601919 ZNF43P17038 809 aa16.62■□□□□ 0.25
SSBP4-212ENST00000601919 PAICSP22234 425 aaKnown RBP16.62■□□□□ 0.25
SSBP4-212ENST00000601919 P2RY4P51582 365 aa16.62■□□□□ 0.25
SSBP4-212ENST00000601919 HSF1Q00613 529 aa16.62■□□□□ 0.25
SSBP4-212ENST00000601919 TEKQ02763 1124 aa16.62■□□□□ 0.25
SSBP4-212ENST00000601919 MAD2L1BPQ15013 274 aaPredicted RBP16.62■□□□□ 0.25
SSBP4-212ENST00000601919 POU4F3Q15319 338 aa16.62■□□□□ 0.25
SSBP4-212ENST00000601919 GPAT4Q86UL3 456 aa16.62■□□□□ 0.25
SSBP4-212ENST00000601919 CCDC71Q8IV32 467 aaPredicted RBP16.62■□□□□ 0.25
SSBP4-212ENST00000601919 ENTHD1Q8IYW4 607 aa16.62■□□□□ 0.25
SSBP4-212ENST00000601919 TCEANCQ8N8B7 351 aa16.62■□□□□ 0.25
SSBP4-212ENST00000601919 RHOXF1Q8NHV9 184 aa16.62■□□□□ 0.25
SSBP4-212ENST00000601919 WBP1Q96G27 269 aa16.62■□□□□ 0.25
SSBP4-212ENST00000601919 PRDM14Q9GZV8 571 aa16.62■□□□□ 0.25
SSBP4-212ENST00000601919 CLN6Q9NWW5 311 aa16.62■□□□□ 0.25
SSBP4-212ENST00000601919 RNF6Q9Y252 685 aa16.62■□□□□ 0.25
SSBP4-212ENST00000601919 A6NIZ1 184 aa16.61■□□□□ 0.25
SSBP4-212ENST00000601919 SNTNA6NMZ2 147 aa16.61■□□□□ 0.25
SSBP4-212ENST00000601919 XKRYO14609 159 aa16.61■□□□□ 0.25
SSBP4-212ENST00000601919 TLX2O43763 284 aaPredicted RBP16.61■□□□□ 0.25
SSBP4-212ENST00000601919 BCL10O95999 233 aa16.61■□□□□ 0.25
SSBP4-212ENST00000601919 RAP1BP61224 184 aa16.61■□□□□ 0.25
SSBP4-212ENST00000601919 RPL27P61353 136 aaKnown RBP16.61■□□□□ 0.25
SSBP4-212ENST00000601919 RAP1AP62834 184 aa16.61■□□□□ 0.25
SSBP4-212ENST00000601919 POU3F1Q03052 451 aaPredicted RBP16.61■□□□□ 0.25
SSBP4-212ENST00000601919 CD47Q08722 323 aa16.61■□□□□ 0.25
SSBP4-212ENST00000601919 TOP3AQ13472 1001 aaPredicted RBP16.61■□□□□ 0.25
SSBP4-212ENST00000601919 SLC35F1Q5T1Q4 408 aa16.61■□□□□ 0.25
SSBP4-212ENST00000601919 MEDAGQ5VYS4 303 aa16.61■□□□□ 0.25
SSBP4-212ENST00000601919 ZNF324BQ6AW86 544 aaPredicted RBP16.61■□□□□ 0.25
SSBP4-212ENST00000601919 FCRLAQ7L513 359 aa16.61■□□□□ 0.25
SSBP4-212ENST00000601919 FAM122BQ7Z309 247 aa16.61■□□□□ 0.25
SSBP4-212ENST00000601919 JAZF1Q86VZ6 243 aa16.61■□□□□ 0.25
SSBP4-212ENST00000601919 FAM26EQ8N5C1 309 aa16.61■□□□□ 0.25
SSBP4-212ENST00000601919 CISD2Q8N5K1 135 aaKnown RBP16.61■□□□□ 0.25
SSBP4-212ENST00000601919 TMEM163Q8TC26 289 aa16.61■□□□□ 0.25
SSBP4-212ENST00000601919 FAR1Q8WVX9 515 aa16.61■□□□□ 0.25
SSBP4-212ENST00000601919 NR1H4Q96RI1 486 aaPredicted RBP16.61■□□□□ 0.25
SSBP4-212ENST00000601919 IL4I1Q96RQ9 567 aa16.61■□□□□ 0.25
SSBP4-212ENST00000601919 PRRG4Q9BZD6 226 aa16.61■□□□□ 0.25
SSBP4-212ENST00000601919 FN3KQ9H479 309 aa16.61■□□□□ 0.25
SSBP4-212ENST00000601919 RASSF1Q9NS23 344 aa16.61■□□□□ 0.25
SSBP4-212ENST00000601919 ADAM18Q9Y3Q7 739 aa16.61■□□□□ 0.25
SSBP4-212ENST00000601919 TEX13CA0A0J9YWL9 993 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 A0A1B0GTH9 108 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 NPIPA2E9PIF3 369 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 NPIPA3F8WFD2 350 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 SMAD9O15198 467 aaKnown RBP16.6■□□□□ 0.25
SSBP4-212ENST00000601919 AKAP8O43823 692 aaKnown RBP16.6■□□□□ 0.25
SSBP4-212ENST00000601919 SERPINI2O75830 405 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 PLGP00747 810 aaPredicted RBP16.6■□□□□ 0.25
SSBP4-212ENST00000601919 FCGR2AP12318 317 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 CSNK2BP67870 215 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 CDK5R2Q13319 367 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 KRR1Q13601 381 aaKnown RBP16.6■□□□□ 0.25
SSBP4-212ENST00000601919 ACKR1Q16570 336 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 SLC25A30Q5SVS4 291 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 GTF2IRD2BQ6EKJ0 949 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 SLC35D2Q76EJ3 337 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 ADCK1Q86TW2 530 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 GTF2IRD2Q86UP8 949 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 CCDC103Q8IW40 242 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 KDM8Q8N371 416 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 ARIH2OSQ8N7S6 290 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 LSM14AQ8ND56 463 aaKnown RBP16.6■□□□□ 0.25
SSBP4-212ENST00000601919 OR52E2Q8NGJ4 325 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 ZPLD1Q8TCW7 415 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 FBLIM1Q8WUP2 373 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 ZNF845Q96IR2 970 aaPredicted RBP16.6■□□□□ 0.25
SSBP4-212ENST00000601919 TSPAN32Q96QS1 320 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 UCN2Q96RP3 112 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 ZNF226Q9NYT6 803 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 H2AFY2Q9P0M6 372 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms