RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 GLSO94925 669 aaPredicted RBP16.16■□□□□ 0.18
VRK3-225ENST00000601912 MT-ND2P03891 347 aa16.16■□□□□ 0.18
VRK3-225ENST00000601912 STSP08842 583 aa16.16■□□□□ 0.18
VRK3-225ENST00000601912 PPIAP62937 165 aaKnown RBP16.16■□□□□ 0.18
VRK3-225ENST00000601912 RAB40BQ12829 278 aa16.16■□□□□ 0.18
VRK3-225ENST00000601912 TMED1Q13445 227 aa16.16■□□□□ 0.18
VRK3-225ENST00000601912 NEDD8Q15843 81 aa16.16■□□□□ 0.18
VRK3-225ENST00000601912 MS4A18Q3C1V0 323 aa16.16■□□□□ 0.18
VRK3-225ENST00000601912 KLHL12Q53G59 568 aa16.16■□□□□ 0.18
VRK3-225ENST00000601912 NIPAL3Q6P499 406 aa16.16■□□□□ 0.18
VRK3-225ENST00000601912 MEPCEQ7L2J0 689 aaKnown RBP16.16■□□□□ 0.18
VRK3-225ENST00000601912 TMEM251Q8N6I4 163 aa16.16■□□□□ 0.18
VRK3-225ENST00000601912 BBS1Q8NFJ9 593 aa16.16■□□□□ 0.18
VRK3-225ENST00000601912 RNFT2Q96EX2 444 aa16.16■□□□□ 0.18
VRK3-225ENST00000601912 TMEM80Q96HE8 168 aa16.16■□□□□ 0.18
VRK3-225ENST00000601912 TSPAN32Q96QS1 320 aa16.16■□□□□ 0.18
VRK3-225ENST00000601912 NMNAT3Q96T66 252 aa16.16■□□□□ 0.18
VRK3-225ENST00000601912 TXNIPQ9H3M7 391 aa16.16■□□□□ 0.18
VRK3-225ENST00000601912 MED20Q9H944 212 aa16.16■□□□□ 0.18
VRK3-225ENST00000601912 MRPS18AQ9NVS2 196 aaKnown RBP16.16■□□□□ 0.18
VRK3-225ENST00000601912 ZNF346Q9UL40 294 aaKnown RBP16.16■□□□□ 0.18
VRK3-225ENST00000601912 SLC22A31A6NKX4 558 aa16.15■□□□□ 0.18
VRK3-225ENST00000601912 XKRYO14609 159 aa16.15■□□□□ 0.18
VRK3-225ENST00000601912 EIF1BO60739 113 aaKnown RBP16.15■□□□□ 0.18
VRK3-225ENST00000601912 C21orf33P30042 268 aaPredicted RBP16.15■□□□□ 0.18
VRK3-225ENST00000601912 MAGEA5P43359 124 aa16.15■□□□□ 0.18
VRK3-225ENST00000601912 ALDH3B2P48448 385 aa16.15■□□□□ 0.18
VRK3-225ENST00000601912 RPL27P61353 136 aaKnown RBP16.15■□□□□ 0.18
VRK3-225ENST00000601912 RPS7P62081 194 aaKnown RBP16.15■□□□□ 0.18
VRK3-225ENST00000601912 MVKQ03426 396 aa16.15■□□□□ 0.18
VRK3-225ENST00000601912 EMX1Q04741 257 aaPredicted RBP16.15■□□□□ 0.18
VRK3-225ENST00000601912 C19orf57Q0VDD7 668 aa16.15■□□□□ 0.18
VRK3-225ENST00000601912 KRR1Q13601 381 aaKnown RBP16.15■□□□□ 0.18
VRK3-225ENST00000601912 ACKR1Q16570 336 aa16.15■□□□□ 0.18
VRK3-225ENST00000601912 ARMC4Q5T2S8 1044 aa16.15■□□□□ 0.18
VRK3-225ENST00000601912 LEG1Q6P5S2 330 aa16.15■□□□□ 0.18
VRK3-225ENST00000601912 PXKQ7Z7A4 578 aa16.15■□□□□ 0.18
VRK3-225ENST00000601912 ZADH2Q8N4Q0 377 aa16.15■□□□□ 0.18
VRK3-225ENST00000601912 NPEPL1Q8NDH3 523 aa16.15■□□□□ 0.18
VRK3-225ENST00000601912 DCBLD2Q96PD2 775 aa16.15■□□□□ 0.18
VRK3-225ENST00000601912 SIGLEC11Q96RL6 698 aa16.15■□□□□ 0.18
VRK3-225ENST00000601912 OR51V1Q9H2C8 321 aa16.15■□□□□ 0.18
VRK3-225ENST00000601912 FANCFQ9NPI8 374 aa16.15■□□□□ 0.18
VRK3-225ENST00000601912 WARS2Q9UGM6 360 aaKnown RBP16.15■□□□□ 0.18
VRK3-225ENST00000601912 PCDHGA9Q9Y5G4 932 aaKnown RBP16.15■□□□□ 0.18
VRK3-225ENST00000601912 A0A1W2PNV4 684 aa16.14■□□□□ 0.18
VRK3-225ENST00000601912 A6NHS1 94 aa16.14■□□□□ 0.18
VRK3-225ENST00000601912 SEC14L5O43304 696 aa16.14■□□□□ 0.18
VRK3-225ENST00000601912 FADS2O95864 444 aaKnown RBP16.14■□□□□ 0.18
VRK3-225ENST00000601912 PLGP00747 810 aaPredicted RBP16.14■□□□□ 0.18
VRK3-225ENST00000601912 IGHMP01871 453 aa16.14■□□□□ 0.18
VRK3-225ENST00000601912 POU3F2P20265 443 aaPredicted RBP16.14■□□□□ 0.18
VRK3-225ENST00000601912 ATP6V1E1P36543 226 aa16.14■□□□□ 0.18
VRK3-225ENST00000601912 DAP3P51398 398 aaKnown RBP16.14■□□□□ 0.18
VRK3-225ENST00000601912 SLC16A1P53985 500 aa16.14■□□□□ 0.18
VRK3-225ENST00000601912 GFRA1P56159 465 aa16.14■□□□□ 0.18
VRK3-225ENST00000601912 LGALS3BPQ08380 585 aa16.14■□□□□ 0.18
VRK3-225ENST00000601912 NADK2Q4G0N4 442 aa16.14■□□□□ 0.18
VRK3-225ENST00000601912 TMEM225Q6GV28 225 aa16.14■□□□□ 0.18
VRK3-225ENST00000601912 PAQR6Q6TCH4 344 aa16.14■□□□□ 0.18
VRK3-225ENST00000601912 ESPNLQ6ZVH7 1005 aa16.14■□□□□ 0.18
VRK3-225ENST00000601912 ADCK1Q86TW2 530 aa16.14■□□□□ 0.18
VRK3-225ENST00000601912 SATL1Q86VE3 508 aa16.14■□□□□ 0.18
VRK3-225ENST00000601912 KDM8Q8N371 416 aa16.14■□□□□ 0.18
VRK3-225ENST00000601912 ARIH2OSQ8N7S6 290 aa16.14■□□□□ 0.18
VRK3-225ENST00000601912 TMEM99Q8N816 258 aa16.14■□□□□ 0.18
VRK3-225ENST00000601912 ZHX1-C8orf76Q96EF9 292 aa16.14■□□□□ 0.18
VRK3-225ENST00000601912 HCAR1Q9BXC0 346 aa16.14■□□□□ 0.18
VRK3-225ENST00000601912 COMMD3-BMI1R4GMX3 469 aa16.14■□□□□ 0.18
VRK3-225ENST00000601912 CELSR3Q9NYQ7 3312 aa16.14■□□□□ 0.17
VRK3-225ENST00000601912 FREM3P0C091 2139 aa16.14■□□□□ 0.17
VRK3-225ENST00000601912 APC2O95996 2303 aa16.14■□□□□ 0.17
VRK3-225ENST00000601912 NPIPA5E9PKD4 350 aa16.14■□□□□ 0.17
VRK3-225ENST00000601912 RENP00797 406 aa16.14■□□□□ 0.17
VRK3-225ENST00000601912 JUNBP17275 347 aaPredicted RBP16.14■□□□□ 0.17
VRK3-225ENST00000601912 DCKP27707 260 aa16.14■□□□□ 0.17
VRK3-225ENST00000601912 ACVR1BP36896 505 aa16.14■□□□□ 0.17
VRK3-225ENST00000601912 CDKN2AP42771 156 aaKnown RBP16.14■□□□□ 0.17
VRK3-225ENST00000601912 SLC10A1Q14973 349 aa16.14■□□□□ 0.17
VRK3-225ENST00000601912 GTF2IRD2BQ6EKJ0 949 aa16.14■□□□□ 0.17
VRK3-225ENST00000601912 LRRC69Q6ZNQ3 347 aa16.14■□□□□ 0.17
VRK3-225ENST00000601912 GTF2IRD2Q86UP8 949 aa16.14■□□□□ 0.17
VRK3-225ENST00000601912 FAM109AQ8N4B1 249 aa16.14■□□□□ 0.17
VRK3-225ENST00000601912 C9orf43Q8TAL5 461 aaPredicted RBP16.14■□□□□ 0.17
VRK3-225ENST00000601912 LGALS12Q96DT0 336 aa16.14■□□□□ 0.17
VRK3-225ENST00000601912 FAM122AQ96E09 287 aa16.14■□□□□ 0.17
VRK3-225ENST00000601912 NAA11Q9BSU3 229 aaPredicted RBP16.14■□□□□ 0.17
VRK3-225ENST00000601912 CDCA4Q9BXL8 241 aa16.14■□□□□ 0.17
VRK3-225ENST00000601912 NDUFA13Q9P0J0 144 aa16.14■□□□□ 0.17
VRK3-225ENST00000601912 NPIPA1Q9UND3 350 aa16.14■□□□□ 0.17
VRK3-225ENST00000601912 CSAG2Q9Y5P2 127 aa16.14■□□□□ 0.17
VRK3-225ENST00000601912 NOX1Q9Y5S8 564 aa16.14■□□□□ 0.17
VRK3-225ENST00000601912 A0A0J9YW62 118 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 OR6C68A6NDL8 312 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 NPIPB13A6NJU9 1138 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 AQP7P3A6NL99 342 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 NPIPB4C9JG80 1138 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 TNFSF11O14788 317 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 DNPH1O43598 174 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 RAB36O95755 333 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms