RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 OFCC1Q8IZS5 231 aa13.4□□□□□ -0.26
LIG1-219ENST00000600055 SGTBQ96EQ0 304 aa13.4□□□□□ -0.26
LIG1-219ENST00000600055 PIK3IP1Q96FE7 263 aa13.4□□□□□ -0.26
LIG1-219ENST00000600055 TXNDC15Q96J42 360 aa13.4□□□□□ -0.26
LIG1-219ENST00000600055 NSMCE2Q96MF7 247 aa13.4□□□□□ -0.26
LIG1-219ENST00000600055 HS6ST2Q96MM7 605 aa13.4□□□□□ -0.26
LIG1-219ENST00000600055 EMC6Q9BV81 110 aa13.4□□□□□ -0.26
LIG1-219ENST00000600055 LIME1Q9H400 295 aa13.4□□□□□ -0.26
LIG1-219ENST00000600055 MED29Q9NX70 200 aa13.4□□□□□ -0.26
LIG1-219ENST00000600055 TAS2R5Q9NYW4 299 aa13.4□□□□□ -0.26
LIG1-219ENST00000600055 TAS2R1Q9NYW7 299 aa13.4□□□□□ -0.26
LIG1-219ENST00000600055 SAMD4AQ9UPU9 718 aaKnown RBP13.4□□□□□ -0.26
LIG1-219ENST00000600055 CIB4A0PJX0 185 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 KLF4O43474 513 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 OR7A10O76100 309 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 ZNF432O94892 652 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 DIRAS1O95057 198 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 ASAH2BP0C7U1 165 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 FUT1P19526 365 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 LOXP28300 417 aaPredicted RBP13.39□□□□□ -0.27
LIG1-219ENST00000600055 IFNA8P32881 189 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 VLDLRP98155 873 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 POU3F1Q03052 451 aaPredicted RBP13.39□□□□□ -0.27
LIG1-219ENST00000600055 TRAM2Q15035 370 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 SPATS1Q496A3 300 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 CARD17Q5XLA6 110 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 CYP2R1Q6VVX0 501 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 POMGNT2Q8NAT1 580 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 PYURFQ96I23 114 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 CLPTM1LQ96KA5 538 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 C7orf34Q96L11 122 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 HS3ST6Q96QI5 342 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 TAS2R16Q9NYV7 291 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 NDUFAF4Q9P032 175 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 ZNF229Q9UJW7 825 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 MED31Q9Y3C7 131 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 APCP25054 2843 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 ITPR2Q14571 2701 aa13.39□□□□□ -0.27
LIG1-219ENST00000600055 A0A1W2PR80 420 aa13.38□□□□□ -0.27
LIG1-219ENST00000600055 KRT33AO76009 404 aa13.38□□□□□ -0.27
LIG1-219ENST00000600055 OR6A2O95222 327 aa13.38□□□□□ -0.27
LIG1-219ENST00000600055 SEMG1P04279 462 aa13.38□□□□□ -0.27
LIG1-219ENST00000600055 HIST1H2ABP04908 130 aa13.38□□□□□ -0.27
LIG1-219ENST00000600055 CDH2P19022 906 aaPredicted RBP13.38□□□□□ -0.27
LIG1-219ENST00000600055 ATP6V1B2P21281 511 aa13.38□□□□□ -0.27
LIG1-219ENST00000600055 GABRA6Q16445 453 aa13.38□□□□□ -0.27
LIG1-219ENST00000600055 IQCCQ4KMZ1 466 aa13.38□□□□□ -0.27
LIG1-219ENST00000600055 TBPL2Q6SJ96 375 aa13.38□□□□□ -0.27
LIG1-219ENST00000600055 SEZ6L2Q6UXD5 910 aa13.38□□□□□ -0.27
LIG1-219ENST00000600055 HIST3H2AQ7L7L0 130 aa13.38□□□□□ -0.27
LIG1-219ENST00000600055 PXKQ7Z7A4 578 aa13.38□□□□□ -0.27
LIG1-219ENST00000600055 PIK3C3Q8NEB9 887 aa13.38□□□□□ -0.27
LIG1-219ENST00000600055 HSD17B8Q92506 261 aa13.38□□□□□ -0.27
LIG1-219ENST00000600055 HIST1H2ACQ93077 130 aa13.38□□□□□ -0.27
LIG1-219ENST00000600055 ALKBH3Q96Q83 286 aaPredicted RBP13.38□□□□□ -0.27
LIG1-219ENST00000600055 OR2M2Q96R28 347 aa13.38□□□□□ -0.27
LIG1-219ENST00000600055 NMNAT1Q9HAN9 279 aaPredicted RBP13.38□□□□□ -0.27
LIG1-219ENST00000600055 RCE1Q9Y256 329 aa13.38□□□□□ -0.27
LIG1-219ENST00000600055 NOX1Q9Y5S8 564 aa13.38□□□□□ -0.27
LIG1-219ENST00000600055 ANKHD1Q8IWZ3 2542 aaKnown RBP13.37□□□□□ -0.27
LIG1-219ENST00000600055 A0A087WUU8 490 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.37□□□□□ -0.27
LIG1-219ENST00000600055 SLC35F4A4IF30 521 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 BLOC1S5-TXNDC5H3BN57 136 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 RNF13O43567 381 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 SLC43A1O75387 559 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 GOSR1O95249 250 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 IGF2P01344 180 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 IFI30P13284 250 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 MAKP20794 623 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 MPGP29372 298 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 MS4A2Q01362 244 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 ZP4Q12836 540 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 PHYHD1Q5SRE7 291 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 NANOGNBQ7Z5D8 188 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 CYP4Z1Q86W10 505 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 NRMQ8IXM6 262 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 TMEM123Q8N131 208 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 ARHGAP24Q8N264 748 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 OR52N5Q8NH56 324 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 PLPPR2Q96GM1 343 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 THTPAQ9BU02 230 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 LINC00470Q9BZP3 86 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 C1orf21Q9H246 121 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 PLEKHF2Q9H8W4 249 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 ACTR3BQ9P1U1 418 aa13.37□□□□□ -0.27
LIG1-219ENST00000600055 FAM32AQ9Y421 112 aaKnown RBP13.37□□□□□ -0.27
LIG1-219ENST00000600055 OR5H1A6NKK0 313 aa13.36□□□□□ -0.27
LIG1-219ENST00000600055 ZNF587BE7ETH6 402 aa13.36□□□□□ -0.27
LIG1-219ENST00000600055 PLAUP00749 431 aa13.36□□□□□ -0.27
LIG1-219ENST00000600055 H1F0P07305 194 aaKnown RBP13.36□□□□□ -0.27
LIG1-219ENST00000600055 IFNGR1P15260 489 aa13.36□□□□□ -0.27
LIG1-219ENST00000600055 RHCEP18577 417 aa13.36□□□□□ -0.27
LIG1-219ENST00000600055 AQP2P41181 271 aa13.36□□□□□ -0.27
LIG1-219ENST00000600055 BIDP55957 195 aa13.36□□□□□ -0.27
LIG1-219ENST00000600055 ROR2Q01974 943 aaKnown RBP13.36□□□□□ -0.27
LIG1-219ENST00000600055 RPL18Q07020 188 aaKnown RBP13.36□□□□□ -0.27
LIG1-219ENST00000600055 CAMK2DQ13557 499 aa13.36□□□□□ -0.27
LIG1-219ENST00000600055 MELKQ14680 651 aa13.36□□□□□ -0.27
LIG1-219ENST00000600055 PPA1Q15181 289 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms