RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 LOXP28300 417 aaPredicted RBP24.8■■□□□ 1.56
SSBP4-206ENST00000599699 YAP1P46937 504 aaKnown RBP24.8■■□□□ 1.56
SSBP4-206ENST00000599699 MNAT1P51948 309 aa24.8■■□□□ 1.56
SSBP4-206ENST00000599699 POU3F1Q03052 451 aaPredicted RBP24.8■■□□□ 1.56
SSBP4-206ENST00000599699 GABRA6Q16445 453 aa24.8■■□□□ 1.56
SSBP4-206ENST00000599699 GLYATQ6IB77 296 aa24.8■■□□□ 1.56
SSBP4-206ENST00000599699 C16orf89Q6UX73 402 aa24.8■■□□□ 1.56
SSBP4-206ENST00000599699 FITM2Q8N6M3 262 aa24.8■■□□□ 1.56
SSBP4-206ENST00000599699 OR52N5Q8NH56 324 aa24.8■■□□□ 1.56
SSBP4-206ENST00000599699 TMEM255BQ8WV15 326 aa24.8■■□□□ 1.56
SSBP4-206ENST00000599699 ESRP2Q9H6T0 727 aaKnown RBP24.8■■□□□ 1.56
SSBP4-206ENST00000599699 FKRPQ9H9S5 495 aa24.8■■□□□ 1.56
SSBP4-206ENST00000599699 NDE1Q9NXR1 346 aa24.8■■□□□ 1.56
SSBP4-206ENST00000599699 RPS6KA6Q9UK32 745 aa24.8■■□□□ 1.56
SSBP4-206ENST00000599699 OTOGQ6ZRI0 2925 aa24.8■■□□□ 1.56
SSBP4-206ENST00000599699 THRBP10828 461 aa24.79■■□□□ 1.56
SSBP4-206ENST00000599699 RBM34P42696 430 aaKnown RBP24.79■■□□□ 1.56
SSBP4-206ENST00000599699 KRT72Q14CN4 511 aa24.79■■□□□ 1.56
SSBP4-206ENST00000599699 SSX8Q7RTT4 187 aa24.79■■□□□ 1.56
SSBP4-206ENST00000599699 FAM156AQ8NDB6 213 aa24.79■■□□□ 1.56
SSBP4-206ENST00000599699 TMEM239Q8WW34 195 aa24.79■■□□□ 1.56
SSBP4-206ENST00000599699 PRRC1Q96M27 445 aa24.79■■□□□ 1.56
SSBP4-206ENST00000599699 ALKBH3Q96Q83 286 aaPredicted RBP24.79■■□□□ 1.56
SSBP4-206ENST00000599699 CDRT15Q96T59 188 aa24.79■■□□□ 1.56
SSBP4-206ENST00000599699 AMBRA1Q9C0C7 1298 aa24.79■■□□□ 1.56
SSBP4-206ENST00000599699 NOX1Q9Y5S8 564 aa24.79■■□□□ 1.56
SSBP4-206ENST00000599699 A0A1W2PR80 420 aa24.78■■□□□ 1.56
SSBP4-206ENST00000599699 C11orf98E9PRG8 122 aa24.78■■□□□ 1.56
SSBP4-206ENST00000599699 TRAF3IP2O43734 574 aaPredicted RBP24.78■■□□□ 1.56
SSBP4-206ENST00000599699 UPK3AO75631 287 aa24.78■■□□□ 1.56
SSBP4-206ENST00000599699 HLA-DOBP13765 273 aa24.78■■□□□ 1.56
SSBP4-206ENST00000599699 HOXC12P31275 282 aa24.78■■□□□ 1.56
SSBP4-206ENST00000599699 ST3GAL3Q11203 375 aa24.78■■□□□ 1.56
SSBP4-206ENST00000599699 SAMD4BQ5PRF9 694 aaKnown RBP24.78■■□□□ 1.56
SSBP4-206ENST00000599699 ZNF704Q6ZNC4 412 aaPredicted RBP24.78■■□□□ 1.56
SSBP4-206ENST00000599699 LRRC17Q8N6Y2 441 aa24.78■■□□□ 1.56
SSBP4-206ENST00000599699 PFN4Q8NHR9 129 aa24.78■■□□□ 1.56
SSBP4-206ENST00000599699 HS6ST2Q96MM7 605 aa24.78■■□□□ 1.56
SSBP4-206ENST00000599699 MUS81Q96NY9 551 aa24.78■■□□□ 1.56
SSBP4-206ENST00000599699 FNDC11Q9BVV2 318 aa24.78■■□□□ 1.56
SSBP4-206ENST00000599699 MEPEQ9NQ76 525 aaPredicted RBP24.78■■□□□ 1.56
SSBP4-206ENST00000599699 ZNF229Q9UJW7 825 aa24.78■■□□□ 1.56
SSBP4-206ENST00000599699 A4GNTQ9UNA3 340 aa24.78■■□□□ 1.56
SSBP4-206ENST00000599699 SNX13Q9Y5W8 968 aa24.78■■□□□ 1.56
SSBP4-206ENST00000599699 CLOCKO15516 846 aa24.77■■□□□ 1.56
SSBP4-206ENST00000599699 MT-ND1P03886 318 aa24.77■■□□□ 1.56
SSBP4-206ENST00000599699 CD3EP07766 207 aa24.77■■□□□ 1.56
SSBP4-206ENST00000599699 ART1P52961 327 aa24.77■■□□□ 1.56
SSBP4-206ENST00000599699 UGT2B15P54855 530 aa24.77■■□□□ 1.56
SSBP4-206ENST00000599699 CARD17Q5XLA6 110 aa24.77■■□□□ 1.56
SSBP4-206ENST00000599699 HMBOX1Q6NT76 420 aa24.77■■□□□ 1.56
SSBP4-206ENST00000599699 PXKQ7Z7A4 578 aa24.77■■□□□ 1.56
SSBP4-206ENST00000599699 DEFB107AQ8IZN7 70 aa24.77■■□□□ 1.56
SSBP4-206ENST00000599699 GPR137CQ8N3F9 429 aa24.77■■□□□ 1.56
SSBP4-206ENST00000599699 C1orf162Q8NEQ5 155 aaPredicted RBP24.77■■□□□ 1.56
SSBP4-206ENST00000599699 NSL1Q96IY1 281 aa24.77■■□□□ 1.56
SSBP4-206ENST00000599699 LINC00470Q9BZP3 86 aa24.77■■□□□ 1.56
SSBP4-206ENST00000599699 RHCGQ9UBD6 479 aa24.77■■□□□ 1.56
SSBP4-206ENST00000599699 MED31Q9Y3C7 131 aa24.77■■□□□ 1.56
SSBP4-206ENST00000599699 PRR14LQ5THK1 2151 aa24.76■■□□□ 1.55
SSBP4-206ENST00000599699 ZNF432O94892 652 aa24.76■■□□□ 1.55
SSBP4-206ENST00000599699 ATE1O95260 518 aa24.76■■□□□ 1.55
SSBP4-206ENST00000599699 PLAUP00749 431 aa24.76■■□□□ 1.55
SSBP4-206ENST00000599699 NCMAPQ5T1S8 102 aa24.76■■□□□ 1.55
SSBP4-206ENST00000599699 NANOGNBQ7Z5D8 188 aa24.76■■□□□ 1.55
SSBP4-206ENST00000599699 PIK3C3Q8NEB9 887 aa24.76■■□□□ 1.55
SSBP4-206ENST00000599699 SGTBQ96EQ0 304 aa24.76■■□□□ 1.55
SSBP4-206ENST00000599699 OR2M2Q96R28 347 aa24.76■■□□□ 1.55
SSBP4-206ENST00000599699 EMC6Q9BV81 110 aa24.76■■□□□ 1.55
SSBP4-206ENST00000599699 MED29Q9NX70 200 aa24.76■■□□□ 1.55
SSBP4-206ENST00000599699 RNF115Q9Y4L5 304 aa24.76■■□□□ 1.55
SSBP4-206ENST00000599699 ZNF726A6NNF4 738 aa24.75■■□□□ 1.55
SSBP4-206ENST00000599699 J3KTA2 159 aa24.75■■□□□ 1.55
SSBP4-206ENST00000599699 RNF13O43567 381 aa24.75■■□□□ 1.55
SSBP4-206ENST00000599699 HSD17B1P14061 328 aa24.75■■□□□ 1.55
SSBP4-206ENST00000599699 ROR2Q01974 943 aaKnown RBP24.75■■□□□ 1.55
SSBP4-206ENST00000599699 BSPH1Q075Z2 132 aa24.75■■□□□ 1.55
SSBP4-206ENST00000599699 ACKR1Q16570 336 aa24.75■■□□□ 1.55
SSBP4-206ENST00000599699 KLHL24Q6TFL4 600 aa24.75■■□□□ 1.55
SSBP4-206ENST00000599699 SEZ6L2Q6UXD5 910 aa24.75■■□□□ 1.55
SSBP4-206ENST00000599699 CYP4Z1Q86W10 505 aa24.75■■□□□ 1.55
SSBP4-206ENST00000599699 C17orf78Q8N4C9 275 aa24.75■■□□□ 1.55
SSBP4-206ENST00000599699 RBM15BQ8NDT2 890 aaKnown RBP24.75■■□□□ 1.55
SSBP4-206ENST00000599699 TXNDC15Q96J42 360 aa24.75■■□□□ 1.55
SSBP4-206ENST00000599699 SLC17A5Q9NRA2 495 aa24.75■■□□□ 1.55
SSBP4-206ENST00000599699 SAMD4AQ9UPU9 718 aaKnown RBP24.75■■□□□ 1.55
SSBP4-206ENST00000599699 SLC25A15Q9Y619 301 aa24.75■■□□□ 1.55
SSBP4-206ENST00000599699 B2RBV5 119 aa24.74■■□□□ 1.55
SSBP4-206ENST00000599699 BLOC1S5-TXNDC5H3BN57 136 aa24.74■■□□□ 1.55
SSBP4-206ENST00000599699 MSX2P35548 267 aaPredicted RBP24.74■■□□□ 1.55
SSBP4-206ENST00000599699 ZNF83P51522 516 aa24.74■■□□□ 1.55
SSBP4-206ENST00000599699 KLHL17Q6TDP4 642 aa24.74■■□□□ 1.55
SSBP4-206ENST00000599699 LINGO2Q7L985 606 aa24.74■■□□□ 1.55
SSBP4-206ENST00000599699 SLC46A3Q7Z3Q1 461 aa24.74■■□□□ 1.55
SSBP4-206ENST00000599699 OFCC1Q8IZS5 231 aa24.74■■□□□ 1.55
SSBP4-206ENST00000599699 ANKK1Q8NFD2 765 aa24.74■■□□□ 1.55
SSBP4-206ENST00000599699 C1QTNF6Q9BXI9 259 aa24.74■■□□□ 1.55
SSBP4-206ENST00000599699 C20orf141Q9NUB4 165 aa24.74■■□□□ 1.55
SSBP4-206ENST00000599699 DCAF13Q9NV06 445 aaKnown RBP24.74■■□□□ 1.55
SSBP4-206ENST00000599699 TAS2R5Q9NYW4 299 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms