RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 IGKV3-15P01624 115 aa10.48□□□□□ -0.73
SOX2-OT-228ENST00000597828 HNRNPCL4P0DMR1 293 aa10.48□□□□□ -0.73
SOX2-OT-228ENST00000597828 ZNF43P17038 809 aa10.48□□□□□ -0.73
SOX2-OT-228ENST00000597828 GTF2E2P29084 291 aaKnown RBP10.48□□□□□ -0.73
SOX2-OT-228ENST00000597828 THBS4P35443 961 aa10.48□□□□□ -0.73
SOX2-OT-228ENST00000597828 PPOXP50336 477 aa10.48□□□□□ -0.73
SOX2-OT-228ENST00000597828 POLR2JP52435 117 aaKnown RBP10.48□□□□□ -0.73
SOX2-OT-228ENST00000597828 RGNQ15493 299 aa10.48□□□□□ -0.73
SOX2-OT-228ENST00000597828 EFNB3Q15768 340 aa10.48□□□□□ -0.73
SOX2-OT-228ENST00000597828 MSMPQ1L6U9 139 aa10.48□□□□□ -0.73
SOX2-OT-228ENST00000597828 CEACAM16Q2WEN9 425 aa10.48□□□□□ -0.73
SOX2-OT-228ENST00000597828 IQCCQ4KMZ1 466 aa10.48□□□□□ -0.73
SOX2-OT-228ENST00000597828 MDP1Q86V88 176 aa10.48□□□□□ -0.73
SOX2-OT-228ENST00000597828 CDK20Q8IZL9 346 aa10.48□□□□□ -0.73
SOX2-OT-228ENST00000597828 MAGEE2Q8TD90 523 aaPredicted RBP10.48□□□□□ -0.73
SOX2-OT-228ENST00000597828 GTF2H4Q92759 462 aa10.48□□□□□ -0.73
SOX2-OT-228ENST00000597828 TAAR8Q969N4 342 aa10.48□□□□□ -0.73
SOX2-OT-228ENST00000597828 ITCHQ96J02 903 aa10.48□□□□□ -0.73
SOX2-OT-228ENST00000597828 GPR35Q9HC97 309 aa10.48□□□□□ -0.73
SOX2-OT-228ENST00000597828 SDR39U1Q9NRG7 319 aaPredicted RBP10.48□□□□□ -0.73
SOX2-OT-228ENST00000597828 PCDHB14Q9Y5E9 798 aa10.48□□□□□ -0.73
SOX2-OT-228ENST00000597828 IGHV2OR16-5A0A0B4J2B6 119 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 A0A1B0GWA3 101 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 TMEM129A0AVI4 362 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 SH3PXD2BA1X283 911 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 LYNX1G3V0Z9 82 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 CLIC1O00299 241 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 TRAF3IP2O43734 574 aaPredicted RBP10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 FZD7O75084 574 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 PDE5AO76074 875 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 STAMBPO95630 424 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 TGFAP01135 160 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 LYNX1P0DP58 116 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 HLA-DOBP13765 273 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 ZNF23P17027 643 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 GRPRP30550 384 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 IL1RL1Q01638 556 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 TRIP10Q15642 601 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 C1QTNF12Q5T7M4 302 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 CARD17Q5XLA6 110 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 KRT80Q6KB66 452 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 C6orf89Q6UWU4 347 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 SPATA21Q7Z572 469 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 MSRB3Q8IXL7 192 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 TMEM123Q8N131 208 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 GPR137CQ8N3F9 429 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 NFKBIDQ8NI38 313 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 BBS10Q8TAM1 723 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 OXGR1Q96P68 337 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 OR2M2Q96R28 347 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 WFDC6Q9BQY6 131 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 EMC6Q9BV81 110 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 TPK1Q9H3S4 243 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 RMND5AQ9H871 391 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 CRLF2Q9HC73 371 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 A4GALTQ9NPC4 353 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 SLC25A37Q9NYZ2 338 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 SLAMF8Q9P0V8 285 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 ZNF232Q9UNY5 417 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 RCE1Q9Y256 329 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 IFT52Q9Y366 437 aa10.47□□□□□ -0.73
SOX2-OT-228ENST00000597828 TMEM247A6NEH6 219 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 OR6C65A6NJZ3 312 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 LRRN3E7EW58 273 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 SLCO1B7G3V0H7 640 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 RPL36A-HNRNPH2H7BZ11 118 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 M0R3G1 203 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 AIM2O14862 343 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 UBDO15205 165 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 TPST1O60507 370 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 SLC43A1O75387 559 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 BMP2P12643 396 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 DAOP14920 347 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 CBR1P16152 277 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 NPR2P20594 1047 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 CAPZA2P47755 286 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 SH3BGRP55822 239 aaPredicted RBP10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 SNTB2Q13425 540 aaKnown RBP10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 CR1LQ2VPA4 569 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 C3orf36Q3SXR2 165 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 MSANTD1Q6ZTZ1 278 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 MIER2Q8N344 545 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 NUP37Q8NFH4 326 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 MS4A3Q96HJ5 214 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 DOK1Q99704 481 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 IKZF5Q9H5V7 419 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 ZNF442Q9H7R0 627 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 CACYBPQ9HB71 228 aaKnown RBP10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 BCL2L10Q9HD36 194 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 MYOZ1Q9NP98 299 aaPredicted RBP10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 KLHL14Q9P2G3 628 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 RPS6KB2Q9UBS0 482 aa10.46□□□□□ -0.73
SOX2-OT-228ENST00000597828 LILRA1O75019 489 aa10.45□□□□□ -0.74
SOX2-OT-228ENST00000597828 HLA-HP01893 362 aa10.45□□□□□ -0.74
SOX2-OT-228ENST00000597828 ARAFP10398 606 aa10.45□□□□□ -0.74
SOX2-OT-228ENST00000597828 FADDQ13158 208 aa10.45□□□□□ -0.74
SOX2-OT-228ENST00000597828 C1DQ13901 141 aaKnown RBP10.45□□□□□ -0.74
SOX2-OT-228ENST00000597828 ADRM1Q16186 407 aa10.45□□□□□ -0.74
SOX2-OT-228ENST00000597828 ZSWIM7Q19AV6 140 aa10.45□□□□□ -0.74
SOX2-OT-228ENST00000597828 ALG10BQ5I7T1 473 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms