RNA–Protein interactions for RNA: ENST00000596386.1

PSMC4-204, Transcript of proteasome 26S subunit, ATPase 4, human

TSL 2

Gene PSMC4, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC4-204	ENST00000596386	LMX1B	O60663	402 aa		13.62	□□□□□ -0.23
PSMC4-204	ENST00000596386	ARAF	P10398	606 aa		13.62	□□□□□ -0.23
PSMC4-204	ENST00000596386	PPOX	P50336	477 aa		13.62	□□□□□ -0.23
PSMC4-204	ENST00000596386	STX1B	P61266	288 aa		13.62	□□□□□ -0.23
PSMC4-204	ENST00000596386	C1D	Q13901	141 aa	Known RBP	13.62	□□□□□ -0.23
PSMC4-204	ENST00000596386	GCNT6	Q5T4J0	391 aa		13.62	□□□□□ -0.23
PSMC4-204	ENST00000596386	DHRS4L2	Q6PKH6	230 aa		13.62	□□□□□ -0.23
PSMC4-204	ENST00000596386	VHLL	Q6RSH7	139 aa		13.62	□□□□□ -0.23
PSMC4-204	ENST00000596386	MYPOP	Q86VE0	399 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMC4-204	ENST00000596386	COMTD1	Q86VU5	262 aa		13.62	□□□□□ -0.23
PSMC4-204	ENST00000596386	MSRB3	Q8IXL7	192 aa		13.62	□□□□□ -0.23
PSMC4-204	ENST00000596386	GPR137C	Q8N3F9	429 aa		13.62	□□□□□ -0.23
PSMC4-204	ENST00000596386	NFKBID	Q8NI38	313 aa		13.62	□□□□□ -0.23
PSMC4-204	ENST00000596386	DNAJA4	Q8WW22	397 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMC4-204	ENST00000596386	PRR14	Q9BWN1	585 aa		13.62	□□□□□ -0.23
PSMC4-204	ENST00000596386	ZNF442	Q9H7R0	627 aa		13.62	□□□□□ -0.23
PSMC4-204	ENST00000596386	TMBIM4	Q9HC24	238 aa		13.62	□□□□□ -0.23
PSMC4-204	ENST00000596386	CRLF2	Q9HC73	371 aa		13.62	□□□□□ -0.23
PSMC4-204	ENST00000596386	GPR35	Q9HC97	309 aa		13.62	□□□□□ -0.23
PSMC4-204	ENST00000596386	TCF7L2	Q9NQB0	619 aa		13.62	□□□□□ -0.23
PSMC4-204	ENST00000596386	FBXO9	Q9UK97	447 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMC4-204	ENST00000596386	TRAV36DV7	A0A075B6V5	113 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	IGHV4-61	A0A0C4DH41	118 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	LOC102725191	A0A1B0GVB3	256 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	POLR3G	O15318	223 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	TRAF3IP2	O43734	574 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	AKAP8	O43823	692 aa	Known RBP	13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	CELA3B	P08861	270 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	CBR1	P16152	277 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	IGFBP5	P24593	272 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	GRPR	P30550	384 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	IDH3G	P51553	393 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	HGFAC	Q04756	655 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	CARTPT	Q16568	116 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	CEACAM16	Q2WEN9	425 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	ALG10B	Q5I7T1	473 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	FAM166A	Q6J272	317 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	REEP3	Q6NUK4	255 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	H1FNT	Q75WM6	255 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	NET1	Q7Z628	596 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	KRT73	Q86Y46	540 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	FUNDC1	Q8IVP5	155 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	TMEM123	Q8N131	208 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	C10orf111	Q8N326	155 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	ARIH2OS	Q8N7S6	290 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	ADPRHL1	Q8NDY3	354 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	PIK3C3	Q8NEB9	887 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	C7orf26	Q96N11	449 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	FOXN4	Q96NZ1	517 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	OR2M2	Q96R28	347 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	SPATA5L1	Q9BVQ7	753 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	SLAMF8	Q9P0V8	285 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	KLHL14	Q9P2G3	628 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	KCNS2	Q9ULS6	477 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	GMEB1	Q9Y692	573 aa		13.61	□□□□□ -0.23
PSMC4-204	ENST00000596386	IGHV2OR16-5	A0A0B4J2B6	119 aa		13.6	□□□□□ -0.23
PSMC4-204	ENST00000596386	LOC100289279	A0A1B0GTE1	492 aa		13.6	□□□□□ -0.23
PSMC4-204	ENST00000596386	ZNF503-AS2	A6NEH8	195 aa		13.6	□□□□□ -0.23
PSMC4-204	ENST00000596386	ZNF99	A8MXY4	864 aa	Predicted RBP	13.6	□□□□□ -0.23
PSMC4-204	ENST00000596386	APEH	P13798	732 aa	Known RBP	13.6	□□□□□ -0.23
PSMC4-204	ENST00000596386	PPIB	P23284	216 aa	Known RBP	13.6	□□□□□ -0.23
PSMC4-204	ENST00000596386	THBS2	P35442	1172 aa		13.6	□□□□□ -0.23
PSMC4-204	ENST00000596386	ARR3	P36575	388 aa		13.6	□□□□□ -0.23
PSMC4-204	ENST00000596386	CDK6	Q00534	326 aa		13.6	□□□□□ -0.23
PSMC4-204	ENST00000596386	FAM91A1	Q658Y4	838 aa		13.6	□□□□□ -0.23
PSMC4-204	ENST00000596386	ULK3	Q6PHR2	472 aa		13.6	□□□□□ -0.23
PSMC4-204	ENST00000596386	BLOC1S3	Q6QNY0	202 aa		13.6	□□□□□ -0.23
PSMC4-204	ENST00000596386	CCDC36	Q8IYA8	594 aa		13.6	□□□□□ -0.23
PSMC4-204	ENST00000596386	ZNF540	Q8NDQ6	660 aa		13.6	□□□□□ -0.23
PSMC4-204	ENST00000596386	MSI2	Q96DH6	328 aa	Known RBP	13.6	□□□□□ -0.23
PSMC4-204	ENST00000596386	ZNF837	Q96EG3	531 aa	Predicted RBP	13.6	□□□□□ -0.23
PSMC4-204	ENST00000596386	BPESC1	Q9GZL8	116 aa		13.6	□□□□□ -0.23
PSMC4-204	ENST00000596386	RAB1B	Q9H0U4	201 aa		13.6	□□□□□ -0.23
PSMC4-204	ENST00000596386	TES	Q9UGI8	421 aa	Known RBP	13.6	□□□□□ -0.23
PSMC4-204	ENST00000596386	CORIN	Q9Y5Q5	1042 aa		13.6	□□□□□ -0.23
PSMC4-204	ENST00000596386	TRBV5-3	A0A0A0MS03	114 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	SLC35F4	A4IF30	521 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	hCG_2039718	K7EN88	272 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	TPST1	O60507	370 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	TGDS	O95455	350 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	ZNF23	P17027	643 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	NPR2	P20594	1047 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	CBL	P22681	906 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	THBS4	P35443	961 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	NCALD	P61601	193 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	IL1RL1	Q01638	556 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	NPRL3	Q12980	569 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	MFSD13A	Q14CX5	517 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	GLIPR1L2	Q4G1C9	344 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	MDP1	Q86V88	176 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	UEVLD	Q8IX04	471 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	OR6S1	Q8NH40	331 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	SPDL1	Q96EA4	605 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	SLC47A1	Q96FL8	570 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	SLC41A3	Q96GZ6	507 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	ANKRD27	Q96NW4	1050 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	EPYC	Q99645	322 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	TMEM38A	Q9H6F2	299 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	CHODL	Q9H9P2	273 aa		13.59	□□□□□ -0.23
PSMC4-204	ENST00000596386	SLC52A3	Q9NQ40	469 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms