RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 ZNF837Q96EG3 531 aaPredicted RBP9.8□□□□□ -0.84
VRK3-210ENST00000596121 PRRC1Q96M27 445 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 MUS81Q96NY9 551 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 OR2M2Q96R28 347 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 EMC6Q9BV81 110 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 SLC19A3Q9BZV2 496 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 POLR2J2Q9GZM3 115 aaKnown RBP9.8□□□□□ -0.84
VRK3-210ENST00000596121 POLR2J3Q9H1A7 115 aaKnown RBP9.8□□□□□ -0.84
VRK3-210ENST00000596121 SLCO5A1Q9H2Y9 848 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 GORASP2Q9H8Y8 452 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 FANCFQ9NPI8 374 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 ASB6Q9NWX5 421 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 MED29Q9NX70 200 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 ZNF226Q9NYT6 803 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 NPAP1Q9NZP6 1156 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 CORINQ9Y5Q5 1042 aa9.8□□□□□ -0.84
VRK3-210ENST00000596121 DPRXA6NFQ7 191 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 OR5H1A6NKK0 313 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 ARPC2O15144 300 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 DIRAS1O95057 198 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 SEMG1P04279 462 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 IFNW1P05000 195 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 NQO1P15559 274 aaKnown RBP9.79□□□□□ -0.84
VRK3-210ENST00000596121 MAKP20794 623 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 RBM34P42696 430 aaKnown RBP9.79□□□□□ -0.84
VRK3-210ENST00000596121 VLDLRP98155 873 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 POU3F1Q03052 451 aaPredicted RBP9.79□□□□□ -0.84
VRK3-210ENST00000596121 PUDPQ08623 228 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 FHL1Q13642 323 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 C1DQ13901 141 aaKnown RBP9.79□□□□□ -0.84
VRK3-210ENST00000596121 MFSD13AQ14CX5 517 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 STK11Q15831 433 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 SAMD4BQ5PRF9 694 aaKnown RBP9.79□□□□□ -0.84
VRK3-210ENST00000596121 C16orf89Q6UX73 402 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 FKBP9P1Q75LS8 142 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 OFCC1Q8IZS5 231 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 LILRB1Q8NHL6 650 aaPredicted RBP9.79□□□□□ -0.84
VRK3-210ENST00000596121 BCAS4Q8TDM0 211 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 GEMIN6Q8WXD5 167 aaKnown RBP9.79□□□□□ -0.84
VRK3-210ENST00000596121 PLPPR2Q96GM1 343 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 TMEM204Q9BSN7 226 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 ASPNQ9BXN1 380 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 FKRPQ9H9S5 495 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 TAS2R16Q9NYV7 291 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 TAS2R1Q9NYW7 299 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 NDUFAF4Q9P032 175 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 UPB1Q9UBR1 384 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 ST6GALNAC2Q9UJ37 374 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 RCE1Q9Y256 329 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 PLEKHA6Q9Y2H5 1048 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 SLC25A15Q9Y619 301 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 ENPP4Q9Y6X5 453 aa9.79□□□□□ -0.84
VRK3-210ENST00000596121 PRRC2AP48634 2157 aaKnown RBP9.78□□□□□ -0.84
VRK3-210ENST00000596121 A0A087WUU8 490 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 SLC35F4A4IF30 521 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 C11orf98E9PRG8 122 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 SERPINI2O75830 405 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 OR7A10O76100 309 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 GOSR1O95249 250 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 TSPAN19P0C672 248 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 ADORA3P0DMS8 318 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 IFNGR1P15260 489 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 CDH2P19022 906 aaPredicted RBP9.78□□□□□ -0.84
VRK3-210ENST00000596121 ATP6V1B2P21281 511 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 AHCYP23526 432 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 MPGP29372 298 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 IST1P53990 364 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 MXRA7P84157 204 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 MS4A2Q01362 244 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 IL1RL1Q01638 556 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 ST3GAL3Q11203 375 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 ZP4Q12836 540 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 PPA1Q15181 289 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 TESK1Q15569 626 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 HIKESHIQ53FT3 197 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 BEX5Q5H9J7 111 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 TIMM23BQ5SRD1 257 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 NCMAPQ5T1S8 102 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 CARD17Q5XLA6 110 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 FBXW10Q5XX13 1052 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 PXKQ7Z7A4 578 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 UEVLDQ8IX04 471 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 POMGNT2Q8NAT1 580 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 PIK3C3Q8NEB9 887 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 OR52N5Q8NH56 324 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 MOSPD2Q8NHP6 518 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 LIPHQ8WWY8 451 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 BCL2L2Q92843 193 aaPredicted RBP9.78□□□□□ -0.84
VRK3-210ENST00000596121 NEUROG1Q92886 237 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 SGTBQ96EQ0 304 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 CLPTM1LQ96KA5 538 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 ALKBH3Q96Q83 286 aaPredicted RBP9.78□□□□□ -0.84
VRK3-210ENST00000596121 C1QTNF6Q9BXI9 259 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 LINC00470Q9BZP3 86 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 NELFAQ9H3P2 528 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 NMNAT1Q9HAN9 279 aaPredicted RBP9.78□□□□□ -0.84
VRK3-210ENST00000596121 NANSQ9NR45 359 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 SLC17A5Q9NRA2 495 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 ZNF229Q9UJW7 825 aa9.78□□□□□ -0.84
VRK3-210ENST00000596121 RPS6KA6Q9UK32 745 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms