RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 KCNAB3O43448 404 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 TRAF3IP2O43734 574 aaPredicted RBP8.57□□□□□ -1.04
LIG1-209ENST00000596104 KRT75O95678 551 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 HLA-HP01893 362 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 TFP02787 698 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 HPXP02790 462 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 BCHEP06276 602 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 ETFAP13804 333 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 ZNF43P17038 809 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 COL8A2P25067 703 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 GPR6P46095 362 aaPredicted RBP8.57□□□□□ -1.04
LIG1-209ENST00000596104 RPS5P46782 204 aaKnown RBP8.57□□□□□ -1.04
LIG1-209ENST00000596104 RPL14P50914 215 aaKnown RBP8.57□□□□□ -1.04
LIG1-209ENST00000596104 ARFIP2P53365 341 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 NME5P56597 212 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 CHI3L2Q15782 390 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 SLC9B1Q4ZJI4 515 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 PHYHD1Q5SRE7 291 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 ATG16L1Q676U5 607 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 C6orf89Q6UWU4 347 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 C1orf229Q6ZS94 237 aaPredicted RBP8.57□□□□□ -1.04
LIG1-209ENST00000596104 SERPINA11Q86U17 422 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 GPR137CQ8N3F9 429 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 PIK3C3Q8NEB9 887 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 SLC38A5Q8WUX1 472 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.57□□□□□ -1.04
LIG1-209ENST00000596104 SLC25A36Q96CQ1 311 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 ZMYND19Q96E35 227 aaPredicted RBP8.57□□□□□ -1.04
LIG1-209ENST00000596104 MS4A3Q96HJ5 214 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 OR2M2Q96R28 347 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 OR52E6Q96RD3 313 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 SPATA9Q9BWV2 254 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 NUF2Q9BZD4 464 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 MEAF6Q9HAF1 191 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 LPAR2Q9HBW0 351 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 CALML5Q9NZT1 146 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 P2RX2Q9UBL9 471 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 REV1Q9UBZ9 1251 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 USP22Q9UPT9 525 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 ZNF99A8MXY4 864 aaPredicted RBP8.56□□□□□ -1.04
LIG1-209ENST00000596104 M0R082 166 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 RP2O75695 350 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 NCR1O76036 304 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 GAAP10253 952 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 SAGP10523 405 aaPredicted RBP8.56□□□□□ -1.04
LIG1-209ENST00000596104 ZNF35P13682 527 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 ZNF14P17017 642 aaPredicted RBP8.56□□□□□ -1.04
LIG1-209ENST00000596104 NCF2P19878 526 aaPredicted RBP8.56□□□□□ -1.04
LIG1-209ENST00000596104 TCN1P20061 433 aaPredicted RBP8.56□□□□□ -1.04
LIG1-209ENST00000596104 ACHEP22303 614 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 GLRXP35754 106 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 ALDH3B1P43353 468 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 SEC24CP53992 1094 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 CRISP3P54108 245 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 HILS1P60008 231 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 LMO4P61968 165 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 ACTG1P63261 375 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 HOXC5Q00444 222 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 LRRC74AQ0VAA2 488 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 C1DQ13901 141 aaKnown RBP8.56□□□□□ -1.04
LIG1-209ENST00000596104 LARS2Q15031 903 aaKnown RBP8.56□□□□□ -1.04
LIG1-209ENST00000596104 FXNQ16595 210 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 RPS26P11Q5JNZ5 115 aaPredicted RBP8.56□□□□□ -1.04
LIG1-209ENST00000596104 USP43Q70EL4 1123 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 ZNF627Q7L945 461 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 LRP11Q86VZ4 500 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 C20orf196Q8IYI0 205 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 SGMS2Q8NHU3 365 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 ZNF417Q8TAU3 575 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 ZNF418Q8TF45 676 aaPredicted RBP8.56□□□□□ -1.04
LIG1-209ENST00000596104 FAM216AQ8WUB2 273 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 RDH5Q92781 318 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 YIPF5Q969M3 257 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 TAAR8Q969N4 342 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 TMEM19Q96HH6 336 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 LRRC37BQ96QE4 947 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 ZNF587Q96SQ5 575 aaPredicted RBP8.56□□□□□ -1.04
LIG1-209ENST00000596104 SYT3Q9BQG1 590 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 RSPO3Q9BXY4 272 aaPredicted RBP8.56□□□□□ -1.04
LIG1-209ENST00000596104 ROPN1BQ9BZX4 212 aaPredicted RBP8.56□□□□□ -1.04
LIG1-209ENST00000596104 MS4A5Q9H3V2 200 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 NARFLQ9H6Q4 476 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 ROPN1Q9HAT0 212 aaPredicted RBP8.56□□□□□ -1.04
LIG1-209ENST00000596104 TREM2Q9NZC2 230 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 MYEF2Q9P2K5 600 aaKnown RBP8.56□□□□□ -1.04
LIG1-209ENST00000596104 GRIP1Q9Y3R0 1128 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 GPR45Q9Y5Y3 372 aa8.56□□□□□ -1.04
LIG1-209ENST00000596104 IGKV1D-42A0A075B6H8 117 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 M0R3G1 203 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 SDHDO14521 159 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 RFXANKO14593 260 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 AIM2O14862 343 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 BIRC5O15392 142 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 RGS9O75916 674 aaPredicted RBP8.55□□□□□ -1.04
LIG1-209ENST00000596104 AVPP01185 164 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 ZCCHC18P0CG32 403 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 GTF2E2P29084 291 aaKnown RBP8.55□□□□□ -1.04
LIG1-209ENST00000596104 GRPRP30550 384 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 CAPZA2P47755 286 aa8.55□□□□□ -1.04
LIG1-209ENST00000596104 SLC1A6P48664 564 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms