RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 AGAP5A6NIR3 686 aa11.84□□□□□ -0.51
SHKBP1-208ENST00000595726 EDF1O60869 148 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-208ENST00000595726 BCHEP06276 602 aa11.84□□□□□ -0.51
SHKBP1-208ENST00000595726 SAGP10523 405 aaPredicted RBP11.84□□□□□ -0.51
SHKBP1-208ENST00000595726 NR2F1P10589 423 aa11.84□□□□□ -0.51
SHKBP1-208ENST00000595726 TCN1P20061 433 aaPredicted RBP11.84□□□□□ -0.51
SHKBP1-208ENST00000595726 NPR2P20594 1047 aa11.84□□□□□ -0.51
SHKBP1-208ENST00000595726 CRATP43155 626 aa11.84□□□□□ -0.51
SHKBP1-208ENST00000595726 GPR6P46095 362 aaPredicted RBP11.84□□□□□ -0.51
SHKBP1-208ENST00000595726 ATP4BP51164 291 aa11.84□□□□□ -0.51
SHKBP1-208ENST00000595726 OR2B6P58173 313 aa11.84□□□□□ -0.51
SHKBP1-208ENST00000595726 KCNJ10P78508 379 aa11.84□□□□□ -0.51
SHKBP1-208ENST00000595726 BLOC1S3Q6QNY0 202 aa11.84□□□□□ -0.51
SHKBP1-208ENST00000595726 MYPOPQ86VE0 399 aaPredicted RBP11.84□□□□□ -0.51
SHKBP1-208ENST00000595726 BPIFB2Q8N4F0 458 aa11.84□□□□□ -0.51
SHKBP1-208ENST00000595726 PIGXQ8TBF5 258 aa11.84□□□□□ -0.51
SHKBP1-208ENST00000595726 ZHX1-C8orf76Q96EF9 292 aa11.84□□□□□ -0.51
SHKBP1-208ENST00000595726 THOC1Q96FV9 657 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-208ENST00000595726 TMPRSS13Q9BYE2 586 aa11.84□□□□□ -0.51
SHKBP1-208ENST00000595726 SLC52A3Q9NQ40 469 aa11.84□□□□□ -0.51
SHKBP1-208ENST00000595726 G6PC2Q9NQR9 355 aa11.84□□□□□ -0.51
SHKBP1-208ENST00000595726 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.84□□□□□ -0.51
SHKBP1-208ENST00000595726 FLVCR1Q9Y5Y0 555 aa11.84□□□□□ -0.51
SHKBP1-208ENST00000595726 WNK1Q9H4A3 2382 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 A0A096LPI6 279 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 TRAV20A0A0B4J274 112 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 LGI1O95970 557 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 HPXP02790 462 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 CELA3BP08861 270 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 CCNA2P20248 432 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 DSTNP60981 165 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 TBRG1Q3YBR2 411 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 PAGE3Q5JUK9 113 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 LRIF1Q5T3J3 769 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 C1QL2Q7Z5L3 287 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 MSRB3Q8IXL7 192 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 CMIPQ8IY22 773 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 ARFGAP2Q8N6H7 521 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 RNF217Q8TC41 542 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 TMEM234Q8WY98 164 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 CNOT9Q92600 299 aaKnown RBP11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 PMM1Q92871 262 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 SPDL1Q96EA4 605 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 ZNF385DQ9H6B1 395 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 MTHFD2LQ9H903 347 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 NPHS2Q9NP85 383 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 CTPS2Q9NRF8 586 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 ACER3Q9NUN7 267 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 TMEM45AQ9NWC5 275 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 PARPBPQ9NWS1 579 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 SLC25A37Q9NYZ2 338 aa11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 FBXO9Q9UK97 447 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-208ENST00000595726 CLIC1O00299 241 aa11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 PMS2P2O95744 297 aa11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 TFP02787 698 aa11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 DBIP07108 87 aaKnown RBP11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 TFPTP0C1Z6 253 aa11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 IL7RP16871 459 aa11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 RYKP34925 604 aa11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 CRISP3P54108 245 aa11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 H3F3AP84243 136 aa11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 SRSF4Q08170 494 aaKnown RBP11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 RGNQ15493 299 aa11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 AGKQ53H12 422 aa11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 RPS26P11Q5JNZ5 115 aaPredicted RBP11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 MRPL2Q5T653 305 aaKnown RBP11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 ZIC4Q8N9L1 334 aa11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 NUP37Q8NFH4 326 aa11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 OR4F15Q8NGB8 312 aa11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 ZNF563Q8TA94 476 aa11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 SLC38A5Q8WUX1 472 aa11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 TMEM19Q96HH6 336 aa11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 PKP2Q99959 881 aa11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 SIKE1Q9BRV8 207 aa11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 CCDC106Q9BWC9 280 aa11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 MED29Q9NX70 200 aa11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 THUMPD1Q9NXG2 353 aaKnown RBP11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 CALML5Q9NZT1 146 aa11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 SLAMF8Q9P0V8 285 aa11.82□□□□□ -0.52
SHKBP1-208ENST00000595726 A0A096LPE4 126 aa11.81□□□□□ -0.52
SHKBP1-208ENST00000595726 TRBV5-3A0A0A0MS03 114 aa11.81□□□□□ -0.52
SHKBP1-208ENST00000595726 A0A1W2PPZ6 126 aa11.81□□□□□ -0.52
SHKBP1-208ENST00000595726 OR6C65A6NJZ3 312 aa11.81□□□□□ -0.52
SHKBP1-208ENST00000595726 AP3D1O14617 1153 aa11.81□□□□□ -0.52
SHKBP1-208ENST00000595726 PPIHO43447 177 aaKnown RBP11.81□□□□□ -0.52
SHKBP1-208ENST00000595726 NUDT7P0C024 238 aa11.81□□□□□ -0.52
SHKBP1-208ENST00000595726 BMP2P12643 396 aa11.81□□□□□ -0.52
SHKBP1-208ENST00000595726 APOBEC1P41238 236 aaKnown RBP11.81□□□□□ -0.52
SHKBP1-208ENST00000595726 FADDQ13158 208 aa11.81□□□□□ -0.52
SHKBP1-208ENST00000595726 GNA13Q14344 377 aa11.81□□□□□ -0.52
SHKBP1-208ENST00000595726 SLC17A1Q14916 467 aa11.81□□□□□ -0.52
SHKBP1-208ENST00000595726 MSMPQ1L6U9 139 aa11.81□□□□□ -0.52
SHKBP1-208ENST00000595726 LIN52Q52LA3 116 aa11.81□□□□□ -0.52
SHKBP1-208ENST00000595726 ZNF836Q6ZNA1 936 aa11.81□□□□□ -0.52
SHKBP1-208ENST00000595726 GRINAQ7Z429 371 aa11.81□□□□□ -0.52
SHKBP1-208ENST00000595726 VRK2Q86Y07 508 aa11.81□□□□□ -0.52
SHKBP1-208ENST00000595726 PEX5LQ8IYB4 626 aa11.81□□□□□ -0.52
SHKBP1-208ENST00000595726 SIGLECL1Q8N7X8 197 aa11.81□□□□□ -0.52
SHKBP1-208ENST00000595726 OR1K1Q8NGR3 316 aa11.81□□□□□ -0.52
SHKBP1-208ENST00000595726 SLC25A43Q8WUT9 341 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms