RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 C11orf98E9PRG8 122 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 KLRC4-KLRK1H3BQV0 150 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 IDH3BO43837 385 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 TRAPPC6AO75865 159 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 PRR23D2P0DMB1 279 aaPredicted RBP13.64□□□□□ -0.23
VRK3-207ENST00000594092 APEHP13798 732 aaKnown RBP13.64□□□□□ -0.23
VRK3-207ENST00000594092 PAICSP22234 425 aaKnown RBP13.64□□□□□ -0.23
VRK3-207ENST00000594092 GTF2E2P29084 291 aaKnown RBP13.64□□□□□ -0.23
VRK3-207ENST00000594092 GSTT1P30711 240 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 HTR1FP30939 366 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 MEOX1P50221 254 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 TMBIM6P55061 237 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 ZNF766Q5HY98 468 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 WIPI1Q5MNZ9 446 aaPredicted RBP13.64□□□□□ -0.23
VRK3-207ENST00000594092 RNLSQ5VYX0 342 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 B3GNT6Q6ZMB0 384 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 ZNF367Q7RTV3 350 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 BBS1Q8NFJ9 593 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 OR52I1Q8NGK6 324 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 LGALS12Q96DT0 336 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 DTNBP1Q96EV8 351 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 MED20Q9H944 212 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 ALKBH4Q9NXW9 302 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 DKK4Q9UBT3 224 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 KLHL21Q9UJP4 597 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 DIMT1Q9UNQ2 313 aaKnown RBP13.64□□□□□ -0.23
VRK3-207ENST00000594092 ERGIC3Q9Y282 383 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 ACACAQ13085 2346 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 FRYQ5TBA9 3013 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 RNF13O43567 381 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 GLSO94925 669 aaPredicted RBP13.64□□□□□ -0.23
VRK3-207ENST00000594092 OR6A2O95222 327 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 PTHP01270 115 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 ACVR2AP27037 513 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 RAC1P63000 192 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 ITGADQ13349 1161 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 CRMP1Q14194 572 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 NIPAL3Q6P499 406 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 H1FNTQ75WM6 255 aaPredicted RBP13.64□□□□□ -0.23
VRK3-207ENST00000594092 CYB561A3Q8NBI2 242 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 SLC37A3Q8NCC5 494 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 OR52E2Q8NGJ4 325 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 OR4K13Q8NH42 304 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 RAB2BQ8WUD1 216 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 PTP4A1Q93096 173 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 C12orf43Q96C57 262 aaKnown RBP13.64□□□□□ -0.23
VRK3-207ENST00000594092 RASD2Q96D21 266 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 Q96M85 177 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 TSC22D3Q99576 134 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 DOK1Q99704 481 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 SMAD5Q99717 465 aaKnown RBP13.64□□□□□ -0.23
VRK3-207ENST00000594092 FUNDC2Q9BWH2 189 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 HCAR1Q9BXC0 346 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 CCDC86Q9H6F5 360 aaKnown RBP13.64□□□□□ -0.23
VRK3-207ENST00000594092 CHST11Q9NPF2 352 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 INIPQ9NRY2 104 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 TAS2R16Q9NYV7 291 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 PTTG2Q9NZH5 202 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 B4GALT7Q9UBV7 327 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 TEX13CA0A0J9YWL9 993 aa13.63□□□□□ -0.23
VRK3-207ENST00000594092 MS4A18H0YCH9 400 aa13.63□□□□□ -0.23
VRK3-207ENST00000594092 IMPA2O14732 288 aa13.63□□□□□ -0.23
VRK3-207ENST00000594092 TXNDC12O95881 172 aa13.63□□□□□ -0.23
VRK3-207ENST00000594092 ADRA2AP08913 450 aa13.63□□□□□ -0.23
VRK3-207ENST00000594092 AHCYP23526 432 aa13.63□□□□□ -0.23
VRK3-207ENST00000594092 SDHAP31040 664 aa13.63□□□□□ -0.23
VRK3-207ENST00000594092 EIF2S3P41091 472 aaKnown RBP13.63□□□□□ -0.23
VRK3-207ENST00000594092 OR2B6P58173 313 aa13.63□□□□□ -0.23
VRK3-207ENST00000594092 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.63□□□□□ -0.23
VRK3-207ENST00000594092 ZP4Q12836 540 aa13.63□□□□□ -0.23
VRK3-207ENST00000594092 TIGD6Q17RP2 521 aa13.63□□□□□ -0.23
VRK3-207ENST00000594092 MS4A18Q3C1V0 323 aa13.63□□□□□ -0.23
VRK3-207ENST00000594092 TMPPEQ6ZT21 453 aa13.63□□□□□ -0.23
VRK3-207ENST00000594092 MEPCEQ7L2J0 689 aaKnown RBP13.63□□□□□ -0.23
VRK3-207ENST00000594092 ALDH16A1Q8IZ83 802 aa13.63□□□□□ -0.23
VRK3-207ENST00000594092 TMEM178AQ8NBL3 297 aa13.63□□□□□ -0.23
VRK3-207ENST00000594092 FAM98AQ8NCA5 519 aaKnown RBP13.63□□□□□ -0.23
VRK3-207ENST00000594092 SDR9C7Q8NEX9 313 aa13.63□□□□□ -0.23
VRK3-207ENST00000594092 SMPDL3BQ92485 455 aa13.63□□□□□ -0.23
VRK3-207ENST00000594092 MIB2Q96AX9 1013 aa13.63□□□□□ -0.23
VRK3-207ENST00000594092 SFXN2Q96NB2 322 aa13.63□□□□□ -0.23
VRK3-207ENST00000594092 TSPAN32Q96QS1 320 aa13.63□□□□□ -0.23
VRK3-207ENST00000594092 MND1Q9BWT6 205 aa13.63□□□□□ -0.23
VRK3-207ENST00000594092 CXorf56Q9H5V9 222 aa13.63□□□□□ -0.23
VRK3-207ENST00000594092 FGF20Q9NP95 211 aaPredicted RBP13.63□□□□□ -0.23
VRK3-207ENST00000594092 CHCHD3Q9NX63 227 aaKnown RBP13.63□□□□□ -0.23
VRK3-207ENST00000594092 TRAPPC4Q9Y296 219 aa13.63□□□□□ -0.23
VRK3-207ENST00000594092 FAM166BA8MTA8 275 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 H3BMQ9 156 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 AKR7A3O95154 331 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 HPNP05981 417 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 MYL12AP19105 171 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 DIO1P49895 249 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 PLGLB1Q02325 96 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 TLE3Q04726 772 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 PUDPQ08623 228 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 DBPQ10586 325 aaPredicted RBP13.62□□□□□ -0.23
VRK3-207ENST00000594092 HYAL4Q2M3T9 481 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 ARMC4Q5T2S8 1044 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms