RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 RPL36A-HNRNPH2H7BZ11 118 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 OR2T1O43869 369 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 IGKV3-15P01624 115 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 HOXB1P14653 301 aaPredicted RBP17.76■□□□□ 0.43
TRIM47-207ENST00000593089 ETS2P15036 469 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 CBR1P16152 277 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 GRPRP30550 384 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 PRKAR1BP31321 381 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 IDH3GP51553 393 aaPredicted RBP17.76■□□□□ 0.43
TRIM47-207ENST00000593089 HGFACQ04756 655 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 EFNB3Q15768 340 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 CEACAM16Q2WEN9 425 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 IQCCQ4KMZ1 466 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 FAM166AQ6J272 317 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 COMTD1Q86VU5 262 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 FAM169BQ8N8A8 192 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 OR4F15Q8NGB8 312 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 RNF217Q8TC41 542 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 TLCD1Q96CP7 247 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 C12orf10Q9HB07 376 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 TMBIM4Q9HC24 238 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 CRLF2Q9HC73 371 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 MOV10Q9HCE1 1003 aaKnown RBP17.76■□□□□ 0.43
TRIM47-207ENST00000593089 SLAMF8Q9P0V8 285 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 IGKV1D-42A0A075B6H8 117 aa17.75■□□□□ 0.43
TRIM47-207ENST00000593089 SLC35F4A4IF30 521 aa17.75■□□□□ 0.43
TRIM47-207ENST00000593089 ZNF503-AS2A6NEH8 195 aa17.75■□□□□ 0.43
TRIM47-207ENST00000593089 ZNF500O60304 480 aaPredicted RBP17.75■□□□□ 0.43
TRIM47-207ENST00000593089 FZD7O75084 574 aa17.75■□□□□ 0.43
TRIM47-207ENST00000593089 SEC14L2O76054 403 aa17.75■□□□□ 0.43
TRIM47-207ENST00000593089 ARAFP10398 606 aa17.75■□□□□ 0.43
TRIM47-207ENST00000593089 THBS4P35443 961 aa17.75■□□□□ 0.43
TRIM47-207ENST00000593089 CAPZA2P47755 286 aa17.75■□□□□ 0.43
TRIM47-207ENST00000593089 PPOXP50336 477 aa17.75■□□□□ 0.43
TRIM47-207ENST00000593089 NPRL3Q12980 569 aa17.75■□□□□ 0.43
TRIM47-207ENST00000593089 GLIPR1L2Q4G1C9 344 aa17.75■□□□□ 0.43
TRIM47-207ENST00000593089 ALG10BQ5I7T1 473 aa17.75■□□□□ 0.43
TRIM47-207ENST00000593089 GCNT6Q5T4J0 391 aa17.75■□□□□ 0.43
TRIM47-207ENST00000593089 C5orf46Q6UWT4 87 aa17.75■□□□□ 0.43
TRIM47-207ENST00000593089 MSRB3Q8IXL7 192 aa17.75■□□□□ 0.43
TRIM47-207ENST00000593089 C10orf111Q8N326 155 aa17.75■□□□□ 0.43
TRIM47-207ENST00000593089 LSMEM1Q8N8F7 131 aa17.75■□□□□ 0.43
TRIM47-207ENST00000593089 PIK3C3Q8NEB9 887 aa17.75■□□□□ 0.43
TRIM47-207ENST00000593089 ANKK1Q8NFD2 765 aa17.75■□□□□ 0.43
TRIM47-207ENST00000593089 NUP37Q8NFH4 326 aa17.75■□□□□ 0.43
TRIM47-207ENST00000593089 MSI2Q96DH6 328 aaKnown RBP17.75■□□□□ 0.43
TRIM47-207ENST00000593089 OR2M2Q96R28 347 aa17.75■□□□□ 0.43
TRIM47-207ENST00000593089 BPESC1Q9GZL8 116 aa17.75■□□□□ 0.43
TRIM47-207ENST00000593089 RAB1BQ9H0U4 201 aa17.75■□□□□ 0.43
TRIM47-207ENST00000593089 TRAV36DV7A0A075B6V5 113 aa17.74■□□□□ 0.43
TRIM47-207ENST00000593089 hCG_2039718K7EN88 272 aa17.74■□□□□ 0.43
TRIM47-207ENST00000593089 M0R3G1 203 aa17.74■□□□□ 0.43
TRIM47-207ENST00000593089 POLR3GO15318 223 aaPredicted RBP17.74■□□□□ 0.43
TRIM47-207ENST00000593089 AKAP8O43823 692 aaKnown RBP17.74■□□□□ 0.43
TRIM47-207ENST00000593089 TPST1O60507 370 aa17.74■□□□□ 0.43
TRIM47-207ENST00000593089 NQO1P15559 274 aaKnown RBP17.74■□□□□ 0.43
TRIM47-207ENST00000593089 CDK6Q00534 326 aa17.74■□□□□ 0.43
TRIM47-207ENST00000593089 PHYHD1Q5SRE7 291 aa17.74■□□□□ 0.43
TRIM47-207ENST00000593089 LRIF1Q5T3J3 769 aa17.74■□□□□ 0.43
TRIM47-207ENST00000593089 CARD17Q5XLA6 110 aa17.74■□□□□ 0.43
TRIM47-207ENST00000593089 DHRS4L2Q6PKH6 230 aa17.74■□□□□ 0.43
TRIM47-207ENST00000593089 H1FNTQ75WM6 255 aaPredicted RBP17.74■□□□□ 0.43
TRIM47-207ENST00000593089 SPATA21Q7Z572 469 aa17.74■□□□□ 0.43
TRIM47-207ENST00000593089 MDP1Q86V88 176 aa17.74■□□□□ 0.43
TRIM47-207ENST00000593089 FUNDC1Q8IVP5 155 aa17.74■□□□□ 0.43
TRIM47-207ENST00000593089 SVOPLQ8N434 492 aa17.74■□□□□ 0.43
TRIM47-207ENST00000593089 DNAJA4Q8WW22 397 aaPredicted RBP17.74■□□□□ 0.43
TRIM47-207ENST00000593089 TCF7L2Q9NQB0 619 aa17.74■□□□□ 0.43
TRIM47-207ENST00000593089 KLHL14Q9P2G3 628 aa17.74■□□□□ 0.43
TRIM47-207ENST00000593089 IGHV2OR16-5A0A0B4J2B6 119 aa17.73■□□□□ 0.43
TRIM47-207ENST00000593089 VSTM5A8MXK1 200 aa17.73■□□□□ 0.43
TRIM47-207ENST00000593089 TRAF3IP2O43734 574 aaPredicted RBP17.73■□□□□ 0.43
TRIM47-207ENST00000593089 SRD5A1P18405 259 aa17.73■□□□□ 0.43
TRIM47-207ENST00000593089 NPR2P20594 1047 aa17.73■□□□□ 0.43
TRIM47-207ENST00000593089 ARR3P36575 388 aa17.73■□□□□ 0.43
TRIM47-207ENST00000593089 NCALDP61601 193 aa17.73■□□□□ 0.43
TRIM47-207ENST00000593089 PAGE3Q5JUK9 113 aa17.73■□□□□ 0.43
TRIM47-207ENST00000593089 FAM120AOSQ5T036 256 aa17.73■□□□□ 0.43
TRIM47-207ENST00000593089 REEP3Q6NUK4 255 aa17.73■□□□□ 0.43
TRIM47-207ENST00000593089 ULK3Q6PHR2 472 aa17.73■□□□□ 0.43
TRIM47-207ENST00000593089 BLOC1S3Q6QNY0 202 aa17.73■□□□□ 0.43
TRIM47-207ENST00000593089 NET1Q7Z628 596 aaPredicted RBP17.73■□□□□ 0.43
TRIM47-207ENST00000593089 KRT73Q86Y46 540 aa17.73■□□□□ 0.43
TRIM47-207ENST00000593089 UEVLDQ8IX04 471 aa17.73■□□□□ 0.43
TRIM47-207ENST00000593089 TMEM123Q8N131 208 aa17.73■□□□□ 0.43
TRIM47-207ENST00000593089 ZCCHC24Q8N2G6 241 aaKnown RBP17.73■□□□□ 0.43
TRIM47-207ENST00000593089 SPDL1Q96EA4 605 aa17.73■□□□□ 0.43
TRIM47-207ENST00000593089 SPATA5L1Q9BVQ7 753 aa17.73■□□□□ 0.43
TRIM47-207ENST00000593089 ZNF442Q9H7R0 627 aa17.73■□□□□ 0.43
TRIM47-207ENST00000593089 CCDC167Q9P0B6 97 aa17.73■□□□□ 0.43
TRIM47-207ENST00000593089 SH3PXD2BA1X283 911 aa17.72■□□□□ 0.43
TRIM47-207ENST00000593089 ZNF99A8MXY4 864 aaPredicted RBP17.72■□□□□ 0.43
TRIM47-207ENST00000593089 MS4A18H0YCH9 400 aa17.72■□□□□ 0.43
TRIM47-207ENST00000593089 HPRP00739 348 aa17.72■□□□□ 0.43
TRIM47-207ENST00000593089 HLA-DOBP13765 273 aa17.72■□□□□ 0.43
TRIM47-207ENST00000593089 ZNF23P17027 643 aa17.72■□□□□ 0.43
TRIM47-207ENST00000593089 MRPL19P49406 292 aaKnown RBP17.72■□□□□ 0.43
TRIM47-207ENST00000593089 RGS8P57771 180 aaPredicted RBP17.72■□□□□ 0.43
TRIM47-207ENST00000593089 MS4A18Q3C1V0 323 aa17.72■□□□□ 0.43
TRIM47-207ENST00000593089 KRTAP24-1Q3LI83 254 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms