RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 DZANK1Q9NVP4 752 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 GPATCH2Q9NW75 528 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 SOHLH2Q9NX45 425 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 MRPL15Q9P015 296 aaKnown RBP3.26□□□□□ -1.89
VMP1-216ENST00000592790 HHLA2Q9UM44 414 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 NPIPA1Q9UND3 350 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 EDARQ9UNE0 448 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 COPS3Q9UNS2 423 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 EXO1Q9UQ84 846 aaKnown RBP3.26□□□□□ -1.89
VMP1-216ENST00000592790 TVP23AA6NH52 213 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 RHPN2P1A8MT19 583 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 TOR1AO14656 332 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 HSPA12AO43301 675 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 HRO43593 1189 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 TMPRSS11DO60235 418 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 RAD1O60671 282 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 PRH1P02810 166 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 CD14P08571 375 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 SLC35E2P0CK97 266 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 APEHP13798 732 aaKnown RBP3.26□□□□□ -1.89
VMP1-216ENST00000592790 PGAM2P15259 253 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 ZNF14P17017 642 aaPredicted RBP3.26□□□□□ -1.89
VMP1-216ENST00000592790 GJA1P17302 382 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 PLXNA3P51805 1871 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 SLC25A1P53007 311 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 RAB38P57729 211 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 ERVK-25P63136 954 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 PRRT3Q5FWE3 981 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 DMKNQ6E0U4 476 aaPredicted RBP3.26□□□□□ -1.89
VMP1-216ENST00000592790 SLC25A24Q6NUK1 477 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 SLC29A4Q7RTT9 530 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 ADGRE4PQ86SQ3 457 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 CACUL1Q86Y37 369 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 ZNF101Q8IZC7 436 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 CMTM4Q8IZR5 234 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 ZNF615Q8N8J6 731 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 ZSCAN1Q8NBB4 408 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 CYB561A3Q8NBI2 242 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 OR13C3Q8NGS6 347 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 OR8S1Q8NH09 359 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 OR52I2Q8NH67 350 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 OR14A16Q8NHC5 309 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 LINC01599Q8WXQ3 324 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 PNPLA2Q96AD5 504 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 LRRC46Q96FV0 321 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 SDF2Q99470 211 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 TMEM121BQ9BXQ6 578 aaPredicted RBP3.26□□□□□ -1.89
VMP1-216ENST00000592790 TGIF2Q9GZN2 237 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 RNF32Q9H0A6 362 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 SLC6A20Q9NP91 592 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 SDHAF3Q9NRP4 125 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 SIRT3Q9NTG7 399 aaPredicted RBP3.26□□□□□ -1.89
VMP1-216ENST00000592790 ASF1BQ9NVP2 202 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 FBXL3Q9UKT7 428 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 LHX6Q9UPM6 363 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 FARSAQ9Y285 508 aaKnown RBP3.26□□□□□ -1.89
VMP1-216ENST00000592790 CHST2Q9Y4C5 530 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 OTOFQ9HC10 1997 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 CEP290O15078 2479 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 TRAV27A0A087WT01 109 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 A0A0J9YY10 115 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 C13orf42A0A1B0GVH6 325 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 A0A1B0GWA3 101 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ANKRD20A5PA0PJZ0 165 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 TMEM202A6NGA9 273 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ERVH48-1M5A8F1 160 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 WRBO00258 174 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 RFXAPO00287 272 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ARPC3O15145 178 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 BCL2L11O43521 198 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 GCM2O75603 506 aaPredicted RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 HLA-AP01891 365 aaKnown RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 H2BFMP0C1H6 154 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 SPI1P17947 270 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 HSD11B1P28845 292 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 TACR3P29371 465 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 CCKBRP32239 447 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 TRHRP34981 398 aaPredicted RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 SOX18P35713 384 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 SRP9P49458 86 aaKnown RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 DAP3P51398 398 aaKnown RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 IL13RA1P78552 427 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 SORDQ00796 357 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 GLO1Q04760 184 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 DBPQ10586 325 aaPredicted RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 SNTB1Q13884 538 aaKnown RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 COL9A2Q14055 689 aaPredicted RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 RPE65Q16518 533 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ST3GAL2Q16842 350 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ABCA11PQ4W5N1 156 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 OR7E24Q6IFN5 339 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 FIGNL1Q6PIW4 674 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 IL34Q6ZMJ4 242 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 KCTD9Q7L273 389 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ZNF595Q8IYB9 648 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 KDM8Q8N371 416 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 BPIFB2Q8N4F0 458 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 FBXL6Q8N531 539 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 COMMD1Q8N668 190 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 LMNTD1Q8N9Z9 388 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms