RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 ISXQ2M1V0 245 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 BCL2L15Q5TBC7 163 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 ZBTB37Q5TC79 503 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 RPL22L1Q6P5R6 122 aaKnown RBP13.01□□□□□ -0.33
RANBP3-229ENST00000592771 KIRREL2Q6UWL6 708 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 IL20RBQ6UXL0 311 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 BTN2A1Q7KYR7 527 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 KRT74Q7RTS7 529 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 TMPRSS9Q7Z410 1059 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 ZNF440Q8IYI8 595 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 PIAS4Q8N2W9 510 aaPredicted RBP13.01□□□□□ -0.33
RANBP3-229ENST00000592771 FAM109AQ8N4B1 249 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 EID2Q8N6I1 236 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 C17orf47Q8NEP4 570 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 ZNF721Q8TF20 911 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 ZNF431Q8TF32 576 aaPredicted RBP13.01□□□□□ -0.33
RANBP3-229ENST00000592771 KLHL1Q9NR64 748 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 ICAM5Q9UMF0 924 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 FRG2CA6NGY1 282 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.01□□□□□ -0.33
RANBP3-229ENST00000592771 AKR7A2O43488 359 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 NOS1APO75052 506 aaPredicted RBP13.01□□□□□ -0.33
RANBP3-229ENST00000592771 PPP1R3DO95685 299 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 CSTAP01040 98 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 NGFRP08138 427 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 NR0B2Q15466 257 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 COL28A1Q2UY09 1125 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 SLC25A35Q3KQZ1 300 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 CDONQ4KMG0 1287 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 ESCO2Q56NI9 601 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 ALG10BQ5I7T1 473 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 SLC35D3Q5M8T2 416 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 FAM69AQ5T7M9 428 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 FAM27D1Q5T7N8 215 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 ULK3Q6PHR2 472 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 UNQ9370/PRO34162Q6UXP9 181 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 ZNF574Q6ZN55 896 aaPredicted RBP13.01□□□□□ -0.33
RANBP3-229ENST00000592771 LSRQ86X29 649 aaPredicted RBP13.01□□□□□ -0.33
RANBP3-229ENST00000592771 THAP4Q8WY91 577 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 ADIPOR1Q96A54 375 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 PHF21AQ96BD5 680 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 LMF1Q96S06 567 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 CNN2Q99439 309 aaKnown RBP13.01□□□□□ -0.33
RANBP3-229ENST00000592771 CACNG6Q9BXT2 260 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 NXF5Q9H1B4 397 aaKnown RBP13.01□□□□□ -0.33
RANBP3-229ENST00000592771 NUDT15Q9NV35 164 aa13.01□□□□□ -0.33
RANBP3-229ENST00000592771 ELF5Q9UKW6 265 aaPredicted RBP13.01□□□□□ -0.33
RANBP3-229ENST00000592771 TRAV27A0A087WT01 109 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 ZNF879B4DU55 563 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 PDCD5O14737 125 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 NDUFB2O95178 105 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 MRPL3P09001 348 aaKnown RBP13□□□□□ -0.33
RANBP3-229ENST00000592771 ACVR1BP36896 505 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 GDI2P50395 445 aaKnown RBP13□□□□□ -0.33
RANBP3-229ENST00000592771 SIRPAP78324 504 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 FHL1Q13642 323 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 UBE2NLQ5JXB2 153 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 ARHGAP40Q5TG30 622 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 PEAR1Q5VY43 1037 aaPredicted RBP13□□□□□ -0.33
RANBP3-229ENST00000592771 GUSBP11Q6P575 273 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 LYPD4Q6UWN0 246 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 OR5J2Q8NH18 312 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 OR51A7Q8NH64 312 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 OR56B4Q8NH76 319 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 LCORQ96JN0 433 aaPredicted RBP13□□□□□ -0.33
RANBP3-229ENST00000592771 TNFRSF13CQ96RJ3 184 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 PLEKHA1Q9HB21 404 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 MCCC2Q9HCC0 563 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 MKKSQ9NPJ1 570 aaPredicted RBP13□□□□□ -0.33
RANBP3-229ENST00000592771 NRIP3Q9NQ35 241 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 UBQLN4Q9NRR5 601 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 CHRNA9Q9UGM1 479 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 NAP1L6A6NFF2 107 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 PRAF2O60831 178 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 PPM1BO75688 479 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 TPPPO94811 219 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 TPOP07202 933 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 LCN1P31025 176 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 PER3P56645 1201 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 IL10RAQ13651 578 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 VWA2Q5GFL6 755 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 CEP78Q5JTW2 689 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 COX15Q7KZN9 410 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 SIAH3Q8IW03 269 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 FAM98AQ8NCA5 519 aaKnown RBP13□□□□□ -0.33
RANBP3-229ENST00000592771 PLPP5Q8NEB5 264 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 OR14A16Q8NHC5 309 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 SMIM4Q8WVI0 70 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 CCNL2Q96S94 520 aaPredicted RBP13□□□□□ -0.33
RANBP3-229ENST00000592771 DPYSL5Q9BPU6 564 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 NUDT9Q9BW91 350 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 OR8D2Q9GZM6 311 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 VN1R1Q9GZP7 353 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 ZFP64Q9NPA5 681 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 EXOSC3Q9NQT5 275 aaKnown RBP13□□□□□ -0.33
RANBP3-229ENST00000592771 SRPK3Q9UPE1 567 aa13□□□□□ -0.33
RANBP3-229ENST00000592771 A0A087WUJ7 227 aa12.99□□□□□ -0.33
RANBP3-229ENST00000592771 A0A1W2PQM1 296 aa12.99□□□□□ -0.33
RANBP3-229ENST00000592771 LINC00862A6NCI5 91 aa12.99□□□□□ -0.33
RANBP3-229ENST00000592771 SYNDIG1LA6NDD5 238 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms