RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 DUSP23Q9BVJ7 150 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.29□□□□□ -0.12
MBD1-227ENST00000592060 ZCCHC4Q9H5U6 513 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 GRHPRQ9UBQ7 328 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 KLHDC2Q9Y2U9 406 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 NPFFR2Q9Y5X5 522 aa14.29□□□□□ -0.12
MBD1-227ENST00000592060 A0A0G2JMP0 313 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 A0A0X1KG70 313 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 OR6C70A6NIJ9 312 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 IDSB3KWA1 339 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 H7C1C5 153 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 NPIPB7O75200 414 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 HIST1H2ABP04908 130 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 FAM157BP0CG42 384 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 IMPDH2P12268 514 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 NPR2P20594 1047 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 RBMS1P29558 406 aaKnown RBP14.28□□□□□ -0.12
MBD1-227ENST00000592060 LCN6P62502 163 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 QPRTQ15274 297 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 HIST3H2AQ7L7L0 130 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 UBALD2Q8IYN6 164 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 SAMD12Q8N8I0 201 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 APCDD1LQ8NCL9 501 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 C19orf18Q8NEA5 215 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 OR4M2Q8NGB6 313 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 TRMT10AQ8TBZ6 339 aaKnown RBP14.28□□□□□ -0.12
MBD1-227ENST00000592060 GPR119Q8TDV5 335 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 SAP25Q8TEE9 199 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 HIST1H2ACQ93077 130 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 PDCD1LG2Q9BQ51 273 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 MESP1Q9BRJ9 268 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 COL25A1Q9BXS0 654 aaPredicted RBP14.28□□□□□ -0.12
MBD1-227ENST00000592060 TAS2R5Q9NYW4 299 aa14.28□□□□□ -0.12
MBD1-227ENST00000592060 TMEM72A0PK05 275 aa14.27□□□□□ -0.12
MBD1-227ENST00000592060 MEIOCA2RUB1 952 aa14.27□□□□□ -0.12
MBD1-227ENST00000592060 CPED1A4D0V7 1026 aa14.27□□□□□ -0.12
MBD1-227ENST00000592060 ARL6IP5O75915 188 aa14.27□□□□□ -0.12
MBD1-227ENST00000592060 FOSL2P15408 326 aa14.27□□□□□ -0.12
MBD1-227ENST00000592060 HOXA6P31267 233 aa14.27□□□□□ -0.12
MBD1-227ENST00000592060 POLR2HP52434 150 aaKnown RBP14.27□□□□□ -0.12
MBD1-227ENST00000592060 CCL7P80098 99 aa14.27□□□□□ -0.12
MBD1-227ENST00000592060 NKAIN1Q4KMZ8 207 aa14.27□□□□□ -0.12
MBD1-227ENST00000592060 PMS2CLQ68D20 193 aa14.27□□□□□ -0.12
MBD1-227ENST00000592060 POMZP3Q6PJE2 187 aa14.27□□□□□ -0.12
MBD1-227ENST00000592060 CDC20BQ86Y33 519 aa14.27□□□□□ -0.12
MBD1-227ENST00000592060 OR14A2Q96R54 314 aa14.27□□□□□ -0.12
MBD1-227ENST00000592060 ADAMTS9Q9P2N4 1935 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 SDK1Q7Z5N4 2213 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 TMED7-TICAM2A0A0A6YYA0 188 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 A0A0B4J293 547 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 CCDC163A0A0D9SF12 145 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 NOTOA8MTQ0 251 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 SUSD5O60279 629 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 NUDT14O95848 222 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 ABHD16AO95870 558 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 PAHP00439 452 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 MT-ATP6P00846 226 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 ATF1P18846 271 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 NANOS3P60323 173 aaKnown RBP14.27□□□□□ -0.13
MBD1-227ENST00000592060 EEF1A1P5Q5VTE0 462 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 SLC6A19Q695T7 634 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 MAMSTRQ6ZN01 415 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 OVCH1Q7RTY7 1134 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 OR6V1Q8N148 313 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 SCAIQ8N9R8 606 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 OR4D9Q8NGE8 314 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 OR6F1Q8NGZ6 308 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 OR2T4Q8NH00 348 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 RGP1Q92546 391 aaPredicted RBP14.27□□□□□ -0.13
MBD1-227ENST00000592060 OR6C1Q96RD1 312 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 SLC7A5P2Q9GIP4 190 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 RBFOX1Q9NWB1 397 aaKnown RBP14.27□□□□□ -0.13
MBD1-227ENST00000592060 PPIEQ9UNP9 301 aaKnown RBP14.27□□□□□ -0.13
MBD1-227ENST00000592060 TMED7Q9Y3B3 224 aa14.27□□□□□ -0.13
MBD1-227ENST00000592060 PI4KAP42356 2102 aa14.26□□□□□ -0.13
MBD1-227ENST00000592060 A0A1W2PPK0 400 aa14.26□□□□□ -0.13
MBD1-227ENST00000592060 TFECO14948 347 aaPredicted RBP14.26□□□□□ -0.13
MBD1-227ENST00000592060 PIN1P1O15428 100 aa14.26□□□□□ -0.13
MBD1-227ENST00000592060 FLRT2O43155 660 aa14.26□□□□□ -0.13
MBD1-227ENST00000592060 SIGLEC6O43699 453 aa14.26□□□□□ -0.13
MBD1-227ENST00000592060 CCNKO75909 580 aa14.26□□□□□ -0.13
MBD1-227ENST00000592060 RENP00797 406 aa14.26□□□□□ -0.13
MBD1-227ENST00000592060 TMED10P49755 219 aaKnown RBP14.26□□□□□ -0.13
MBD1-227ENST00000592060 SF3A2Q15428 464 aaKnown RBP14.26□□□□□ -0.13
MBD1-227ENST00000592060 SGCBQ16585 318 aa14.26□□□□□ -0.13
MBD1-227ENST00000592060 ZNF385CQ66K41 422 aaPredicted RBP14.26□□□□□ -0.13
MBD1-227ENST00000592060 C16orf47Q6ZP98 133 aaPredicted RBP14.26□□□□□ -0.13
MBD1-227ENST00000592060 MAMDC2Q7Z304 686 aaPredicted RBP14.26□□□□□ -0.13
MBD1-227ENST00000592060 GRINAQ7Z429 371 aa14.26□□□□□ -0.13
MBD1-227ENST00000592060 SYT9Q86SS6 491 aa14.26□□□□□ -0.13
MBD1-227ENST00000592060 ADGRG3Q86Y34 549 aa14.26□□□□□ -0.13
MBD1-227ENST00000592060 OR5H6Q8NGV6 325 aa14.26□□□□□ -0.13
MBD1-227ENST00000592060 ENKURQ8TC29 256 aa14.26□□□□□ -0.13
MBD1-227ENST00000592060 PHYHIPQ92561 330 aa14.26□□□□□ -0.13
MBD1-227ENST00000592060 TRIM63Q969Q1 353 aa14.26□□□□□ -0.13
MBD1-227ENST00000592060 RNF121Q9H920 327 aa14.26□□□□□ -0.13
MBD1-227ENST00000592060 SRA1Q9HD15 236 aaKnown RBP14.26□□□□□ -0.13
MBD1-227ENST00000592060 FSCN3Q9NQT6 498 aa14.26□□□□□ -0.13
MBD1-227ENST00000592060 TAS2R10Q9NYW0 307 aa14.26□□□□□ -0.13
MBD1-227ENST00000592060 MRM2Q9UI43 246 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms