RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 EVA1AQ9H8M9 152 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 ASB6Q9NWX5 421 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 TAS2R16Q9NYV7 291 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 TMEM181Q9P2C4 612 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 PRSS50Q9UI38 385 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 PRDM4Q9UKN5 801 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 SLC35A3Q9Y2D2 325 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 HDGFL3Q9Y3E1 203 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 USF3Q68DE3 2245 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 MXRA5Q9NR99 2828 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 STAB1Q9NY15 2570 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 IGKV3D-15A0A087WSY6 115 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 AQP12BA6NM10 295 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 C9JVG2 144 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 NPIPB9F8W1W9 429 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 CLIC1O00299 241 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 SMAD9O15198 467 aaKnown RBP8.3□□□□□ -1.08
BRCA1-226ENST00000591534 EIF1BO60739 113 aaKnown RBP8.3□□□□□ -1.08
BRCA1-226ENST00000591534 RAMP1O60894 148 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 C6orf47O95873 294 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 IGLV1-40P01703 118 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 TFPIP10646 304 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 FCGR1AP12314 374 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 HNF1AP20823 631 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 MATN1P21941 496 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 IGHV1-2P23083 117 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 PAX7P23759 505 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 THBS2P35442 1172 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 SOAT1P35610 550 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 HTR3AP46098 478 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 CASP9P55211 416 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 PHC1P78364 1004 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 VLDLRP98155 873 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 CHRNEQ04844 493 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 FLOT2Q14254 428 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 GPR68Q15743 365 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 TOMM34Q15785 309 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-226ENST00000591534 ZNF141Q15928 474 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 TMEM249Q2WGJ8 235 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.3□□□□□ -1.08
BRCA1-226ENST00000591534 PDZK1Q5T2W1 519 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 PRAMEF8Q5VWM4 474 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 PRAMEF7Q5VXH5 474 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 NANOGP8Q6NSW7 305 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 OLIG3Q7RTU3 272 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 DHFR2Q86XF0 187 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 KRT73Q86Y46 540 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 AQP12AQ8IXF9 295 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 CLECL1Q8IZS7 167 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 ZNF433Q8N7K0 673 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-226ENST00000591534 C11orf65Q8NCR3 313 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 OR2T12Q8NG77 320 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 OR10H5Q8NGA6 315 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 OR52E4Q8NGH9 312 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 ZNF563Q8TA94 476 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 LZICQ8WZA0 190 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 VPS33AQ96AX1 596 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 OR7D2Q96RA2 312 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 SDF2Q99470 211 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 NAA11Q9BSU3 229 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-226ENST00000591534 INPP5KQ9BT40 448 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 CADM1Q9BY67 442 aaKnown RBP8.3□□□□□ -1.08
BRCA1-226ENST00000591534 ARMC7Q9H6L4 198 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 DCLRE1BQ9H816 532 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 NANOGQ9H9S0 305 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 C8orf4Q9NR00 106 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 POLE3Q9NRF9 147 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 ACER3Q9NUN7 267 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 GPATCH2Q9NW75 528 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 ACTR3BQ9P1U1 418 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 UPB1Q9UBR1 384 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 RPS6KA6Q9UK32 745 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 FKBP7Q9Y680 259 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 KCNE3Q9Y6H6 103 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 ROS1P08922 2347 aa8.3□□□□□ -1.08
BRCA1-226ENST00000591534 IGHV4-30-2A0A087WSY4 118 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 NPIPA5A0A0B4J1W7 369 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 NPIPA7E9PJI5 369 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 H3BS24 57 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 H7C417 338 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 FBP2O00757 339 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 PHF1O43189 567 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-226ENST00000591534 NDUFS7O75251 213 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 RAD51DO75771 328 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 PMS2P2O95744 297 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 WNT11O96014 354 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 GPIP06744 558 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 GUSBP08236 651 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 NPIPA8P0DM63 369 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 UQCRBP14927 111 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 GPX2P18283 190 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 FSTP19883 344 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 SLC6A2P23975 617 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 CD40P25942 277 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 ECI1P42126 302 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 GZMKP49863 264 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 ZNF83P51522 516 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 MAP2K6P52564 334 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 SLC7A2P52569 658 aa8.29□□□□□ -1.08
BRCA1-226ENST00000591534 EFNA4P52798 201 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms