RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 IFFO1Q0D2I5 559 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 MAD2L1BPQ15013 274 aaPredicted RBP13.68□□□□□ -0.22
DDX39A-216ENST00000591275 TNFAIP8L3Q5GJ75 292 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 COX20Q5RI15 118 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 ATG16L1Q676U5 607 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 WBP2NLQ6ICG8 309 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 ZNF836Q6ZNA1 936 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 C1orf229Q6ZS94 237 aaPredicted RBP13.68□□□□□ -0.22
DDX39A-216ENST00000591275 VRK2Q86Y07 508 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 PEX5LQ8IYB4 626 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 OR51F2Q8NH61 342 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 TCP10LQ8TDR4 215 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 YIPF5Q969M3 257 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 MS4A3Q96HJ5 214 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 RBM4Q9BWF3 364 aaKnown RBP13.68□□□□□ -0.22
DDX39A-216ENST00000591275 RACGAP1Q9H0H5 632 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 ZNF275Q9NSD4 429 aaPredicted RBP13.68□□□□□ -0.22
DDX39A-216ENST00000591275 FZR1Q9UM11 496 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 PPIHO43447 177 aaKnown RBP13.67□□□□□ -0.22
DDX39A-216ENST00000591275 NPIPB7O75200 414 aa13.67□□□□□ -0.22
DDX39A-216ENST00000591275 ZNF432O94892 652 aa13.67□□□□□ -0.22
DDX39A-216ENST00000591275 AHSA1O95433 338 aa13.67□□□□□ -0.22
DDX39A-216ENST00000591275 AVPP01185 164 aa13.67□□□□□ -0.22
DDX39A-216ENST00000591275 HLA-HP01893 362 aa13.67□□□□□ -0.22
DDX39A-216ENST00000591275 TFP02787 698 aa13.67□□□□□ -0.22
DDX39A-216ENST00000591275 ZNF43P17038 809 aa13.67□□□□□ -0.22
DDX39A-216ENST00000591275 NCF2P19878 526 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-216ENST00000591275 ACHEP22303 614 aa13.67□□□□□ -0.22
DDX39A-216ENST00000591275 RPS5P46782 204 aaKnown RBP13.67□□□□□ -0.22
DDX39A-216ENST00000591275 POU3F1Q03052 451 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-216ENST00000591275 SMU1Q2TAY7 513 aa13.67□□□□□ -0.22
DDX39A-216ENST00000591275 SLC9B1Q4ZJI4 515 aa13.67□□□□□ -0.22
DDX39A-216ENST00000591275 AWAT1Q58HT5 328 aa13.67□□□□□ -0.22
DDX39A-216ENST00000591275 LRP11Q86VZ4 500 aa13.67□□□□□ -0.22
DDX39A-216ENST00000591275 RIBC1Q8N443 379 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-216ENST00000591275 IL17RDQ8NFM7 739 aa13.67□□□□□ -0.22
DDX39A-216ENST00000591275 RDH5Q92781 318 aa13.67□□□□□ -0.22
DDX39A-216ENST00000591275 TESCQ96BS2 214 aa13.67□□□□□ -0.22
DDX39A-216ENST00000591275 MS4A5Q9H3V2 200 aa13.67□□□□□ -0.22
DDX39A-216ENST00000591275 RCE1Q9Y256 329 aa13.67□□□□□ -0.22
DDX39A-216ENST00000591275 CCDC154A6NI56 674 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 FTCDNL1E5RQL4 147 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 NCR1O76036 304 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 PNPP00491 289 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 GSNP06396 782 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 CD79AP11912 226 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 S100A3P33764 101 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 CDKN2CP42773 168 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 ANXA11P50995 505 aaKnown RBP13.66□□□□□ -0.22
DDX39A-216ENST00000591275 ARFIP2P53365 341 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 NME5P56597 212 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 LMO4P61968 165 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 PIGFQ07326 219 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 MAPK11Q15759 364 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 CHI3L2Q15782 390 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 TTMPQ5BVD1 217 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 ZNF311Q5JNZ3 666 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 USP43Q70EL4 1123 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 CLIP4Q8N3C7 705 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 ANKK1Q8NFD2 765 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 OR52P1PQ8NH57 321 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 MFSD8Q8NHS3 518 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 TLCD1Q96CP7 247 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 CCDC115Q96NT0 180 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 JMJD8Q96S16 334 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 MYEF2Q9P2K5 600 aaKnown RBP13.66□□□□□ -0.22
DDX39A-216ENST00000591275 B3GAT1Q9P2W7 334 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 BTNL2Q9UIR0 455 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 PCDHGB1Q9Y5G3 927 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 NOX1Q9Y5S8 564 aa13.66□□□□□ -0.22
DDX39A-216ENST00000591275 TRAV20A0A0B4J274 112 aa13.65□□□□□ -0.22
DDX39A-216ENST00000591275 ZNF99A8MXY4 864 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-216ENST00000591275 E9PBE3 544 aa13.65□□□□□ -0.22
DDX39A-216ENST00000591275 M0R3G1 203 aa13.65□□□□□ -0.22
DDX39A-216ENST00000591275 ITM2AO43736 263 aa13.65□□□□□ -0.22
DDX39A-216ENST00000591275 SHOX2O60902 331 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-216ENST00000591275 BPGMP07738 259 aa13.65□□□□□ -0.22
DDX39A-216ENST00000591275 NAT2P11245 290 aa13.65□□□□□ -0.22
DDX39A-216ENST00000591275 GTF2E2P29084 291 aaKnown RBP13.65□□□□□ -0.22
DDX39A-216ENST00000591275 EVX1P49640 407 aa13.65□□□□□ -0.22
DDX39A-216ENST00000591275 C1DQ13901 141 aaKnown RBP13.65□□□□□ -0.22
DDX39A-216ENST00000591275 ALKBH6Q3KRA9 238 aa13.65□□□□□ -0.22
DDX39A-216ENST00000591275 LIN52Q52LA3 116 aa13.65□□□□□ -0.22
DDX39A-216ENST00000591275 PHYHD1Q5SRE7 291 aa13.65□□□□□ -0.22
DDX39A-216ENST00000591275 CARD17Q5XLA6 110 aa13.65□□□□□ -0.22
DDX39A-216ENST00000591275 ZNF621Q6ZSS3 439 aa13.65□□□□□ -0.22
DDX39A-216ENST00000591275 ZNF781Q8N8C0 355 aa13.65□□□□□ -0.22
DDX39A-216ENST00000591275 KTI12Q96EK9 354 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-216ENST00000591275 TEX37Q96LM6 180 aa13.65□□□□□ -0.22
DDX39A-216ENST00000591275 OXGR1Q96P68 337 aa13.65□□□□□ -0.22
DDX39A-216ENST00000591275 OR2M2Q96R28 347 aa13.65□□□□□ -0.22
DDX39A-216ENST00000591275 PANX1Q96RD7 426 aa13.65□□□□□ -0.22
DDX39A-216ENST00000591275 SLC6A7Q99884 636 aa13.65□□□□□ -0.22
DDX39A-216ENST00000591275 PTDSS2Q9BVG9 487 aa13.65□□□□□ -0.22
DDX39A-216ENST00000591275 B3GNT2Q9NY97 397 aa13.65□□□□□ -0.22
DDX39A-216ENST00000591275 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-216ENST00000591275 ZNF443Q9Y2A4 671 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-216ENST00000591275 TRRAPQ9Y4A5 3859 aa13.65□□□□□ -0.23
DDX39A-216ENST00000591275 A0A096LPI6 279 aa13.64□□□□□ -0.23
DDX39A-216ENST00000591275 TMPRSS2O15393 492 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms