RNA–Protein interactions for RNA: ENST00000589017.5

PRKAR1A-216, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 3

Gene PRKAR1A, Length 1,116 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-216ENST00000589017 SH3BGRP55822 239 aaPredicted RBP16.3■□□□□ 0.2
PRKAR1A-216ENST00000589017 IL1RL1Q01638 556 aa16.3■□□□□ 0.2
PRKAR1A-216ENST00000589017 LTBQ06643 244 aa16.3■□□□□ 0.2
PRKAR1A-216ENST00000589017 LINC00114Q6XXX2 140 aa16.3■□□□□ 0.2
PRKAR1A-216ENST00000589017 RBM45Q8IUH3 476 aaKnown RBP16.3■□□□□ 0.2
PRKAR1A-216ENST00000589017 DEPDC4Q8N2C3 294 aa16.3■□□□□ 0.2
PRKAR1A-216ENST00000589017 PCYOX1LQ8NBM8 494 aa16.3■□□□□ 0.2
PRKAR1A-216ENST00000589017 ANKK1Q8NFD2 765 aa16.3■□□□□ 0.2
PRKAR1A-216ENST00000589017 VANGL1Q8TAA9 524 aaPredicted RBP16.3■□□□□ 0.2
PRKAR1A-216ENST00000589017 GTPBP3Q969Y2 492 aaKnown RBP16.3■□□□□ 0.2
PRKAR1A-216ENST00000589017 MOGAT1Q96PD6 335 aa16.3■□□□□ 0.2
PRKAR1A-216ENST00000589017 ZNF317Q96PQ6 595 aaPredicted RBP16.3■□□□□ 0.2
PRKAR1A-216ENST00000589017 ECSITQ9BQ95 431 aa16.3■□□□□ 0.2
PRKAR1A-216ENST00000589017 PCDHAC1Q9H158 963 aa16.3■□□□□ 0.2
PRKAR1A-216ENST00000589017 ALG2Q9H553 416 aa16.3■□□□□ 0.2
PRKAR1A-216ENST00000589017 MRPL39Q9NYK5 338 aaKnown RBP16.3■□□□□ 0.2
PRKAR1A-216ENST00000589017 POU2F3Q9UKI9 436 aa16.3■□□□□ 0.2
PRKAR1A-216ENST00000589017 CAPN7Q9Y6W3 813 aa16.3■□□□□ 0.2
PRKAR1A-216ENST00000589017 LOC100653049A0A140TA62 436 aa16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 E7EQL1 145 aa16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 MS4A18H0YCH9 400 aa16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 RPL36A-HNRNPH2H7BZ11 118 aa16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 KRT34O76011 436 aa16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 LYPD3O95274 346 aa16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 HPRP00739 348 aa16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 MDH1P40925 334 aaKnown RBP16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 ROR2Q01974 943 aaKnown RBP16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 VEZF1Q14119 521 aa16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 MS4A18Q3C1V0 323 aa16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 TBRG1Q3YBR2 411 aa16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 HMBOX1Q6NT76 420 aa16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 ERICH5Q6P6B1 374 aa16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 B3GLCTQ6Y288 498 aa16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 WDR88Q6ZMY6 472 aa16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 UEVLDQ8IX04 471 aa16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 TMEM123Q8N131 208 aa16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 MAGEE2Q8TD90 523 aaPredicted RBP16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 ADAMTS16Q8TE57 1224 aa16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 C10orf82Q8WW14 230 aa16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 BCL2L2Q92843 193 aaPredicted RBP16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 OR2M2Q96R28 347 aa16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 DHRS9Q9BPW9 319 aa16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 GID8Q9NWU2 228 aa16.29■□□□□ 0.2
PRKAR1A-216ENST00000589017 ARPC4-TTLL3A0A0A6YYG9 625 aa16.28■□□□□ 0.2
PRKAR1A-216ENST00000589017 TRAPPC13A5PLN9 417 aa16.28■□□□□ 0.2
PRKAR1A-216ENST00000589017 FAM171A2A8MVW0 826 aa16.28■□□□□ 0.2
PRKAR1A-216ENST00000589017 LRRN3E7EW58 273 aa16.28■□□□□ 0.2
PRKAR1A-216ENST00000589017 MT-ATP6P00846 226 aa16.28■□□□□ 0.2
PRKAR1A-216ENST00000589017 THY1P04216 161 aa16.28■□□□□ 0.2
PRKAR1A-216ENST00000589017 PAX7P23759 505 aa16.28■□□□□ 0.2
PRKAR1A-216ENST00000589017 PMS2P3Q13401 168 aa16.28■□□□□ 0.2
PRKAR1A-216ENST00000589017 ETFDHQ16134 617 aa16.28■□□□□ 0.2
PRKAR1A-216ENST00000589017 AGAP6Q5VW22 663 aa16.28■□□□□ 0.2
PRKAR1A-216ENST00000589017 ANKRD16Q6P6B7 361 aa16.28■□□□□ 0.2
PRKAR1A-216ENST00000589017 TSPYL5Q86VY4 417 aaPredicted RBP16.28■□□□□ 0.2
PRKAR1A-216ENST00000589017 GPR137CQ8N3F9 429 aa16.28■□□□□ 0.2
PRKAR1A-216ENST00000589017 C10orf53Q8N6V4 93 aa16.28■□□□□ 0.2
PRKAR1A-216ENST00000589017 PIK3C3Q8NEB9 887 aa16.28■□□□□ 0.2
PRKAR1A-216ENST00000589017 ZNF583Q96ND8 569 aa16.28■□□□□ 0.2
PRKAR1A-216ENST00000589017 NELFAQ9H3P2 528 aa16.28■□□□□ 0.2
PRKAR1A-216ENST00000589017 FKRPQ9H9S5 495 aa16.28■□□□□ 0.2
PRKAR1A-216ENST00000589017 ARMCX1Q9P291 453 aa16.28■□□□□ 0.2
PRKAR1A-216ENST00000589017 SLC7A7Q9UM01 511 aa16.28■□□□□ 0.2
PRKAR1A-216ENST00000589017 NOX1Q9Y5S8 564 aa16.28■□□□□ 0.2
PRKAR1A-216ENST00000589017 SETD2Q9BYW2 2564 aaPredicted RBP16.28■□□□□ 0.2
PRKAR1A-216ENST00000589017 HLA-DOBP13765 273 aa16.27■□□□□ 0.2
PRKAR1A-216ENST00000589017 TTKP33981 857 aa16.27■□□□□ 0.2
PRKAR1A-216ENST00000589017 UBE2NP61088 152 aaKnown RBP16.27■□□□□ 0.2
PRKAR1A-216ENST00000589017 POU3F1Q03052 451 aaPredicted RBP16.27■□□□□ 0.2
PRKAR1A-216ENST00000589017 PUDPQ08623 228 aa16.27■□□□□ 0.2
PRKAR1A-216ENST00000589017 C11orf71Q6IPW1 123 aa16.27■□□□□ 0.2
PRKAR1A-216ENST00000589017 TTC33Q6PID6 262 aaPredicted RBP16.27■□□□□ 0.2
PRKAR1A-216ENST00000589017 CLEC9AQ6UXN8 241 aa16.27■□□□□ 0.2
PRKAR1A-216ENST00000589017 PROX1Q92786 737 aa16.27■□□□□ 0.2
PRKAR1A-216ENST00000589017 MPP4Q96JB8 637 aa16.27■□□□□ 0.2
PRKAR1A-216ENST00000589017 ZNF426Q9BUY5 554 aa16.27■□□□□ 0.2
PRKAR1A-216ENST00000589017 GPR35Q9HC97 309 aa16.27■□□□□ 0.2
PRKAR1A-216ENST00000589017 BAG5Q9UL15 447 aa16.27■□□□□ 0.2
PRKAR1A-216ENST00000589017 USP22Q9UPT9 525 aa16.27■□□□□ 0.2
PRKAR1A-216ENST00000589017 ZFHX3Q15911 3703 aa16.27■□□□□ 0.19
PRKAR1A-216ENST00000589017 USF3Q68DE3 2245 aa16.26■□□□□ 0.19
PRKAR1A-216ENST00000589017 IGHV1-18A0A0C4DH31 117 aa16.26■□□□□ 0.19
PRKAR1A-216ENST00000589017 FAM220BPB1ANY3 271 aa16.26■□□□□ 0.19
PRKAR1A-216ENST00000589017 PLPP3O14495 311 aa16.26■□□□□ 0.19
PRKAR1A-216ENST00000589017 HEXAP06865 529 aa16.26■□□□□ 0.19
PRKAR1A-216ENST00000589017 HOXB1P14653 301 aaPredicted RBP16.26■□□□□ 0.19
PRKAR1A-216ENST00000589017 ARF1P84077 181 aaKnown RBP16.26■□□□□ 0.19
PRKAR1A-216ENST00000589017 CLEC12BQ2HXU8 276 aa16.26■□□□□ 0.19
PRKAR1A-216ENST00000589017 ZNF544Q6NX49 715 aa16.26■□□□□ 0.19
PRKAR1A-216ENST00000589017 NHLRC1Q6VVB1 395 aa16.26■□□□□ 0.19
PRKAR1A-216ENST00000589017 PXKQ7Z7A4 578 aa16.26■□□□□ 0.19
PRKAR1A-216ENST00000589017 FBXL14Q8N1E6 418 aa16.26■□□□□ 0.19
PRKAR1A-216ENST00000589017 OR5J2Q8NH18 312 aa16.26■□□□□ 0.19
PRKAR1A-216ENST00000589017 RCN3Q96D15 328 aa16.26■□□□□ 0.19
PRKAR1A-216ENST00000589017 SLC19A3Q9BZV2 496 aa16.26■□□□□ 0.19
PRKAR1A-216ENST00000589017 CRLF2Q9HC73 371 aa16.26■□□□□ 0.19
PRKAR1A-216ENST00000589017 MOV10Q9HCE1 1003 aaKnown RBP16.26■□□□□ 0.19
PRKAR1A-216ENST00000589017 CBLN4Q9NTU7 201 aa16.26■□□□□ 0.19
PRKAR1A-216ENST00000589017 ATP23Q9Y6H3 246 aa16.26■□□□□ 0.19
PRKAR1A-216ENST00000589017 A0A096LPE4 126 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms