RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 FANCFQ9NPI8 374 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 OR6A2O95222 327 aa23.36■■□□□ 1.33
SCAMP4-210ENST00000588555 PMS2P2O95744 297 aa23.36■■□□□ 1.33
SCAMP4-210ENST00000588555 SLC2A5P22732 501 aa23.36■■□□□ 1.33
SCAMP4-210ENST00000588555 AHCYP23526 432 aa23.36■■□□□ 1.33
SCAMP4-210ENST00000588555 HTR1FP30939 366 aa23.36■■□□□ 1.33
SCAMP4-210ENST00000588555 TLE3Q04726 772 aa23.36■■□□□ 1.33
SCAMP4-210ENST00000588555 EMC4Q5J8M3 183 aa23.36■■□□□ 1.33
SCAMP4-210ENST00000588555 GPR139Q6DWJ6 353 aa23.36■■□□□ 1.33
SCAMP4-210ENST00000588555 SATL1Q86VE3 508 aa23.36■■□□□ 1.33
SCAMP4-210ENST00000588555 GID4Q8IVV7 300 aa23.36■■□□□ 1.33
SCAMP4-210ENST00000588555 TMEM251Q8N6I4 163 aa23.36■■□□□ 1.33
SCAMP4-210ENST00000588555 FAM98AQ8NCA5 519 aaKnown RBP23.36■■□□□ 1.33
SCAMP4-210ENST00000588555 ADPRHL1Q8NDY3 354 aa23.36■■□□□ 1.33
SCAMP4-210ENST00000588555 NMNAT3Q96T66 252 aa23.36■■□□□ 1.33
SCAMP4-210ENST00000588555 IGHMP01871 453 aa23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 JUNBP17275 347 aaPredicted RBP23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 MAGEA5P43359 124 aa23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 MTNR1AP48039 350 aa23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 MESTQ5EB52 335 aa23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 STX19Q8N4C7 294 aa23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 ZPLD1Q8TCW7 415 aa23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 OTULINQ96BN8 352 aa23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 LGALS12Q96DT0 336 aa23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 SFXN2Q96NB2 322 aa23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 CCDC86Q9H6F5 360 aaKnown RBP23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 GRHPRQ9UBQ7 328 aa23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 ZNF346Q9UL40 294 aaKnown RBP23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 FAM166BA8MTA8 275 aa23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 SULT2B1O00204 365 aa23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 CELA3AP09093 270 aa23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 ACVR2AP27037 513 aa23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 CDKN2AP42771 156 aaKnown RBP23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 OR2B6P58173 313 aa23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 NEDD8Q15843 81 aa23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 ACKR1Q16570 336 aa23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 ZNF239Q16600 458 aaKnown RBP23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 PNPLA5Q7Z6Z6 429 aaPredicted RBP23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 KDM8Q8N371 416 aa23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 TMEM99Q8N816 258 aa23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 KISS1RQ969F8 398 aaPredicted RBP23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 KLHL15Q96M94 604 aa23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 NMNAT2Q9BZQ4 307 aa23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 TXNIPQ9H3M7 391 aa23.35■■□□□ 1.33
SCAMP4-210ENST00000588555 A0A0J9YW62 118 aa23.34■■□□□ 1.33
SCAMP4-210ENST00000588555 A0A1W2PNV4 684 aa23.34■■□□□ 1.33
SCAMP4-210ENST00000588555 OR6C68A6NDL8 312 aa23.34■■□□□ 1.33
SCAMP4-210ENST00000588555 PLGP00747 810 aaPredicted RBP23.34■■□□□ 1.33
SCAMP4-210ENST00000588555 CLUP10909 449 aa23.34■■□□□ 1.33
SCAMP4-210ENST00000588555 HLA-DOBP13765 273 aa23.34■■□□□ 1.33
SCAMP4-210ENST00000588555 PAICSP22234 425 aaKnown RBP23.34■■□□□ 1.33
SCAMP4-210ENST00000588555 CD97P48960 835 aa23.34■■□□□ 1.33
SCAMP4-210ENST00000588555 PLGLB1Q02325 96 aa23.34■■□□□ 1.33
SCAMP4-210ENST00000588555 KRR1Q13601 381 aaKnown RBP23.34■■□□□ 1.33
SCAMP4-210ENST00000588555 MEPCEQ7L2J0 689 aaKnown RBP23.34■■□□□ 1.33
SCAMP4-210ENST00000588555 GGNQ86UU5 652 aa23.34■■□□□ 1.33
SCAMP4-210ENST00000588555 SMPDL3BQ92485 455 aa23.34■■□□□ 1.33
SCAMP4-210ENST00000588555 TMIGD2Q96BF3 282 aa23.34■■□□□ 1.33
SCAMP4-210ENST00000588555 RNFT2Q96EX2 444 aa23.34■■□□□ 1.33
SCAMP4-210ENST00000588555 H2AFY2Q9P0M6 372 aaPredicted RBP23.34■■□□□ 1.33
SCAMP4-210ENST00000588555 B3GAT1Q9P2W7 334 aa23.34■■□□□ 1.33
SCAMP4-210ENST00000588555 CCDC182A6NF36 153 aa23.33■■□□□ 1.33
SCAMP4-210ENST00000588555 ZNF814B7Z6K7 855 aa23.33■■□□□ 1.33
SCAMP4-210ENST00000588555 MAP2K4P45985 399 aa23.33■■□□□ 1.33
SCAMP4-210ENST00000588555 CLDN20P56880 219 aa23.33■■□□□ 1.33
SCAMP4-210ENST00000588555 SLC35A1P78382 337 aa23.33■■□□□ 1.33
SCAMP4-210ENST00000588555 RAB40BQ12829 278 aa23.33■■□□□ 1.33
SCAMP4-210ENST00000588555 IRF3Q14653 427 aa23.33■■□□□ 1.33
SCAMP4-210ENST00000588555 ARIH2OSQ8N7S6 290 aa23.33■■□□□ 1.33
SCAMP4-210ENST00000588555 OR52I1Q8NGK6 324 aa23.33■■□□□ 1.33
SCAMP4-210ENST00000588555 ZNF519Q8TB69 540 aa23.33■■□□□ 1.33
SCAMP4-210ENST00000588555 FAR1Q8WVX9 515 aa23.33■■□□□ 1.33
SCAMP4-210ENST00000588555 CDCA4Q9BXL8 241 aa23.33■■□□□ 1.33
SCAMP4-210ENST00000588555 MFRPQ9BY79 579 aa23.33■■□□□ 1.33
SCAMP4-210ENST00000588555 GJE1A6NN92 205 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 SERPINI2O75830 405 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 FADS2O95864 444 aaKnown RBP23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 RPL27P61353 136 aaKnown RBP23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 H3F3AP84243 136 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 GTF2IRD2BQ6EKJ0 949 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 LEG1Q6P5S2 330 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 NHLRC1Q6VVB1 395 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 GTF2IRD2Q86UP8 949 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 OR9Q1Q8NGQ5 310 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 ACOT13Q9NPJ3 140 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 QPCTLQ9NXS2 382 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 PCDHGA9Q9Y5G4 932 aaKnown RBP23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 COMMD3-BMI1R4GMX3 469 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 IGF2RP11717 2491 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 NPIPB13A6NJU9 1138 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 NPIPB4C9JG80 1138 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 H0YC42 278 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 LINC01387J3KSC0 135 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 ADRB1P08588 477 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 KLK2P20151 261 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 ID4P47928 161 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 KLHL22Q53GT1 634 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 PAQR6Q6TCH4 344 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 PXKQ7Z7A4 578 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 JAZF1Q86VZ6 243 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms