RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 CBLL1Q75N03 491 aa16.89■□□□□ 0.29
CIRBP-217ENST00000588230 VTCN1Q7Z7D3 282 aa16.89■□□□□ 0.29
CIRBP-217ENST00000588230 RNF148Q8N7C7 305 aa16.89■□□□□ 0.29
CIRBP-217ENST00000588230 MUS81Q96NY9 551 aa16.89■□□□□ 0.29
CIRBP-217ENST00000588230 ALPK1Q96QP1 1244 aa16.89■□□□□ 0.29
CIRBP-217ENST00000588230 ZNF426Q9BUY5 554 aa16.89■□□□□ 0.29
CIRBP-217ENST00000588230 UBTD1Q9HAC8 227 aa16.89■□□□□ 0.29
CIRBP-217ENST00000588230 NANSQ9NR45 359 aa16.89■□□□□ 0.29
CIRBP-217ENST00000588230 ZNF587BE7ETH6 402 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 PLPP3O14495 311 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 HPRP00739 348 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 HIST1H2ABP04908 130 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 THRBP10828 461 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 CDH2P19022 906 aaPredicted RBP16.88■□□□□ 0.29
CIRBP-217ENST00000588230 CD53P19397 219 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 AHCYP23526 432 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 RBM34P42696 430 aaKnown RBP16.88■□□□□ 0.29
CIRBP-217ENST00000588230 MNAT1P51948 309 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 MXRA7P84157 204 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 PUDPQ08623 228 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 IFI44LQ53G44 452 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 ZNF704Q6ZNC4 412 aaPredicted RBP16.88■□□□□ 0.29
CIRBP-217ENST00000588230 HIST3H2AQ7L7L0 130 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 NKAIN4Q8IVV8 208 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 PGAM4Q8N0Y7 254 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 CCDC197Q8NCU1 140 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 C1orf162Q8NEQ5 155 aaPredicted RBP16.88■□□□□ 0.29
CIRBP-217ENST00000588230 OR5J2Q8NH18 312 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 OR52N5Q8NH56 324 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 GEMIN6Q8WXD5 167 aaKnown RBP16.88■□□□□ 0.29
CIRBP-217ENST00000588230 HIST1H2ACQ93077 130 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 HS6ST2Q96MM7 605 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 FKRPQ9H9S5 495 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 FAM53CQ9NYF3 392 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 EGFL7Q9UHF1 273 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 NOX1Q9Y5S8 564 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 NF1P21359 2839 aa16.88■□□□□ 0.29
CIRBP-217ENST00000588230 RAI1Q7Z5J4 1906 aaPredicted RBP16.88■□□□□ 0.29
CIRBP-217ENST00000588230 TRAF3IP2O43734 574 aaPredicted RBP16.87■□□□□ 0.29
CIRBP-217ENST00000588230 SLC43A1O75387 559 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 UPK3AO75631 287 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 CD3EP07766 207 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 ADORA3P0DMS8 318 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 UMPSP11172 480 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 HOXC12P31275 282 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 SLC25A3Q00325 362 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 POU3F1Q03052 451 aaPredicted RBP16.87■□□□□ 0.29
CIRBP-217ENST00000588230 LGALS3BPQ08380 585 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 ST3GAL3Q11203 375 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 KRT72Q14CN4 511 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 NCMAPQ5T1S8 102 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 GLYATQ6IB77 296 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 C16orf89Q6UX73 402 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 TMEM255BQ8WV15 326 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 HSH2DQ96JZ2 352 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 PRRC1Q96M27 445 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 ALKBH3Q96Q83 286 aaPredicted RBP16.87■□□□□ 0.29
CIRBP-217ENST00000588230 CDRT15Q96T59 188 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 LINC00470Q9BZP3 86 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 AMBRA1Q9C0C7 1298 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 NDE1Q9NXR1 346 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 ZNF229Q9UJW7 825 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 RPS6KA6Q9UK32 745 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 ADAM21Q9UKJ8 722 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 C2CD3Q4AC94 2353 aa16.87■□□□□ 0.29
CIRBP-217ENST00000588230 A0A1W2PR80 420 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 C11orf98E9PRG8 122 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 CLOCKO15516 846 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 SERPINI2O75830 405 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 ZNF432O94892 652 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 PLAUP00749 431 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 MT-ND1P03886 318 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 HLA-DOBP13765 273 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 YAP1P46937 504 aaKnown RBP16.86■□□□□ 0.29
CIRBP-217ENST00000588230 ACKR1Q16570 336 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 DEFB113Q30KQ7 82 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 HMBOX1Q6NT76 420 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 SEZ6L2Q6UXD5 910 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 PXKQ7Z7A4 578 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 KRTAP1-3Q8IUG1 177 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 GPR137CQ8N3F9 429 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 C17orf78Q8N4C9 275 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 FITM2Q8N6M3 262 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 LRRC17Q8N6Y2 441 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 PIK3C3Q8NEB9 887 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 TMEM239Q8WW34 195 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 TMEM204Q9BSN7 226 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 TMUB1Q9BVT8 246 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 FNDC11Q9BVV2 318 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 MEPEQ9NQ76 525 aaPredicted RBP16.86■□□□□ 0.29
CIRBP-217ENST00000588230 A4GNTQ9UNA3 340 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 MED31Q9Y3C7 131 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 RNF115Q9Y4L5 304 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 SNX13Q9Y5W8 968 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 SLC25A15Q9Y619 301 aa16.86■□□□□ 0.29
CIRBP-217ENST00000588230 DPRXA6NFQ7 191 aa16.85■□□□□ 0.29
CIRBP-217ENST00000588230 ZNF726A6NNF4 738 aa16.85■□□□□ 0.29
CIRBP-217ENST00000588230 TCN1P20061 433 aaPredicted RBP16.85■□□□□ 0.29
CIRBP-217ENST00000588230 UGT2B15P54855 530 aa16.85■□□□□ 0.29
CIRBP-217ENST00000588230 ROR2Q01974 943 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms