RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 TMPRSS3P57727 454 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 CLRN1P58418 232 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 RPL27P61353 136 aaKnown RBP5.58□□□□□ -1.52
LIG3-206ENST00000586058 ACTA2P62736 377 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 RAC1P63000 192 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 ERVK-25P63136 954 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 ACTG2P63267 376 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 POU3F1Q03052 451 aaPredicted RBP5.58□□□□□ -1.52
LIG3-206ENST00000586058 EGR4Q05215 589 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 MYBPHQ13203 477 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 CRMP1Q14194 572 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 PON3Q15166 354 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 SMN1Q16637 294 aaKnown RBP5.58□□□□□ -1.52
LIG3-206ENST00000586058 TMEM176BQ3YBM2 270 aaPredicted RBP5.58□□□□□ -1.52
LIG3-206ENST00000586058 NADK2Q4G0N4 442 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 SPINK14Q6IE38 97 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 ACSM5Q6NUN0 579 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 ZNF544Q6NX49 715 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 TMPRSS11AQ6ZMR5 421 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 ESPNLQ6ZVH7 1005 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 MEPCEQ7L2J0 689 aaKnown RBP5.58□□□□□ -1.52
LIG3-206ENST00000586058 GALNTL5Q7Z4T8 443 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 GPAT4Q86UL3 456 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 SATL1Q86VE3 508 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 CCDC71Q8IV32 467 aaPredicted RBP5.58□□□□□ -1.52
LIG3-206ENST00000586058 CPOQ8IVL8 374 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 UBQLNLQ8IYU4 475 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 SPARTQ8N0X7 666 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 FAM109AQ8N4B1 249 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 KLHL36Q8N4N3 616 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 LRRC17Q8N6Y2 441 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 WDSUB1Q8N9V3 476 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 SLC37A3Q8NCC5 494 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 OR6K6Q8NGW6 343 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 OR4K13Q8NH42 304 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 ZNF420Q8TAQ5 688 aaPredicted RBP5.58□□□□□ -1.52
LIG3-206ENST00000586058 PSMF1Q92530 271 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 CPNE4Q96A23 557 aaPredicted RBP5.58□□□□□ -1.52
LIG3-206ENST00000586058 ADAD1Q96M93 576 aaKnown RBP5.58□□□□□ -1.52
LIG3-206ENST00000586058 KLHL15Q96M94 604 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 GNRHR2Q96P88 292 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 SNX18Q96RF0 628 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 CNN2Q99439 309 aaKnown RBP5.58□□□□□ -1.52
LIG3-206ENST00000586058 TTTY12Q9BZ98 90 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 OR2B2Q9GZK3 357 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 OR11A1Q9GZK7 315 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 OR51V1Q9H2C8 321 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 TXNIPQ9H3M7 391 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 DUSP21Q9H596 190 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 CCDC86Q9H6F5 360 aaKnown RBP5.58□□□□□ -1.52
LIG3-206ENST00000586058 ZNF703Q9H7S9 590 aaPredicted RBP5.58□□□□□ -1.52
LIG3-206ENST00000586058 SH2D2AQ9NP31 389 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 AMBNQ9NP70 447 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 NRIP3Q9NQ35 241 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 HINT3Q9NQE9 182 aaKnown RBP5.58□□□□□ -1.52
LIG3-206ENST00000586058 ASB6Q9NWX5 421 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 ERVK-18Q9QC07 812 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 RSL24D1Q9UHA3 163 aaKnown RBP5.58□□□□□ -1.52
LIG3-206ENST00000586058 DIMT1Q9UNQ2 313 aaKnown RBP5.58□□□□□ -1.52
LIG3-206ENST00000586058 RASD1Q9Y272 281 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 TRAPPC4Q9Y296 219 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 MSRB2Q9Y3D2 182 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 DAPL1A0PJW8 107 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 ZC3H12DA2A288 527 aaKnown RBP5.57□□□□□ -1.52
LIG3-206ENST00000586058 OR2M5A3KFT3 312 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 DPPA5A6NC42 116 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 TRIM64A6NGJ6 449 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 NPIPB13A6NJU9 1138 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 LIPT2A6NK58 231 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 FAM183AA6NL82 134 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 ZNF726A6NNF4 738 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 C17orf51A8MQB3 221 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 FAM166BA8MTA8 275 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 SHISA8B8ZZ34 492 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 NPIPB4C9JG80 1138 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 E9PQ18 207 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 ZNF670-ZNF695F2Z2N8 137 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 NKX2-8O15522 239 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 EFSO43281 561 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 ARHGEF9O43307 516 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 AHCYL1O43865 530 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 NPIPB7O75200 414 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 TRMUO75648 421 aaKnown RBP5.57□□□□□ -1.52
LIG3-206ENST00000586058 NEURL1O76050 574 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 AKR7A3O95154 331 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 IGHG1P01857 330 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 TSPAN19P0C672 248 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 HSMCR30P0CW71 290 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 HIST1H1CP16403 213 aaKnown RBP5.57□□□□□ -1.52
LIG3-206ENST00000586058 ZNF24P17028 368 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 JUNBP17275 347 aaPredicted RBP5.57□□□□□ -1.52
LIG3-206ENST00000586058 ENPP1P22413 925 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 WNT4P56705 351 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 TAS2R43P59537 309 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 HSF1Q00613 529 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 GLO1Q04760 184 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 ZP4Q12836 540 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 RAB39AQ14964 217 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 TIGD6Q17RP2 521 aa5.57□□□□□ -1.52
LIG3-206ENST00000586058 GXYLT1Q4G148 440 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms