RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 TMEM239Q8WW34 195 aa14.3□□□□□ -0.12
ERBB2-222ENST00000584908 NRGNQ92686 78 aa14.3□□□□□ -0.12
ERBB2-222ENST00000584908 FAM162AQ96A26 154 aa14.3□□□□□ -0.12
ERBB2-222ENST00000584908 PIK3IP1Q96FE7 263 aa14.3□□□□□ -0.12
ERBB2-222ENST00000584908 NSL1Q96IY1 281 aa14.3□□□□□ -0.12
ERBB2-222ENST00000584908 CDRT15Q96T59 188 aa14.3□□□□□ -0.12
ERBB2-222ENST00000584908 TMEM204Q9BSN7 226 aa14.3□□□□□ -0.12
ERBB2-222ENST00000584908 LIME1Q9H400 295 aa14.3□□□□□ -0.12
ERBB2-222ENST00000584908 NANSQ9NR45 359 aa14.3□□□□□ -0.12
ERBB2-222ENST00000584908 ST6GALNAC2Q9UJ37 374 aa14.3□□□□□ -0.12
ERBB2-222ENST00000584908 NOX1Q9Y5S8 564 aa14.3□□□□□ -0.12
ERBB2-222ENST00000584908 SNX13Q9Y5W8 968 aa14.3□□□□□ -0.12
ERBB2-222ENST00000584908 RPL36A-HNRNPH2H7BZ11 118 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 FFAR1O14842 300 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 PRSS23O95084 383 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 CH25HO95992 272 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 TSPAN19P0C672 248 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 T-ENOLP0DO92 83 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 HLA-DOBP13765 273 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 UGT2B15P54855 530 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 CLDN17P56750 224 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 TGFBR3Q03167 851 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 C1DQ13901 141 aaKnown RBP14.29□□□□□ -0.12
ERBB2-222ENST00000584908 NIPAL3Q6P499 406 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 PAMR1Q6UXH9 720 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 TSEN54Q7Z6J9 526 aaKnown RBP14.29□□□□□ -0.12
ERBB2-222ENST00000584908 WFDC8Q8IUA0 241 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 UEVLDQ8IX04 471 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 DEFB107AQ8IZN7 70 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 TMEM123Q8N131 208 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 C17orf78Q8N4C9 275 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 C10orf53Q8N6V4 93 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 HS3ST6Q96QI5 342 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 OR2M2Q96R28 347 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 NGBQ9NPG2 151 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 MAN2C1Q9NTJ4 1040 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 TAS2R5Q9NYW4 299 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 MAGEL2Q9UJ55 1249 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 EDARQ9UNE0 448 aa14.29□□□□□ -0.12
ERBB2-222ENST00000584908 SAMD4AQ9UPU9 718 aaKnown RBP14.29□□□□□ -0.12
ERBB2-222ENST00000584908 CIB4A0PJX0 185 aa14.28□□□□□ -0.12
ERBB2-222ENST00000584908 ENO4A6NNW6 628 aa14.28□□□□□ -0.12
ERBB2-222ENST00000584908 AKAP8O43823 692 aaKnown RBP14.28□□□□□ -0.12
ERBB2-222ENST00000584908 RAD51DO75771 328 aa14.28□□□□□ -0.12
ERBB2-222ENST00000584908 CALB2P22676 271 aa14.28□□□□□ -0.12
ERBB2-222ENST00000584908 IFNA8P32881 189 aa14.28□□□□□ -0.12
ERBB2-222ENST00000584908 PPA1Q15181 289 aa14.28□□□□□ -0.12
ERBB2-222ENST00000584908 NCMAPQ5T1S8 102 aa14.28□□□□□ -0.12
ERBB2-222ENST00000584908 FKBP9P1Q75LS8 142 aa14.28□□□□□ -0.12
ERBB2-222ENST00000584908 ARHGAP24Q8N264 748 aa14.28□□□□□ -0.12
ERBB2-222ENST00000584908 FAM156AQ8NDB6 213 aa14.28□□□□□ -0.12
ERBB2-222ENST00000584908 RBM15BQ8NDT2 890 aaKnown RBP14.28□□□□□ -0.12
ERBB2-222ENST00000584908 MUCL1Q96DR8 90 aa14.28□□□□□ -0.12
ERBB2-222ENST00000584908 PLPPR2Q96GM1 343 aa14.28□□□□□ -0.12
ERBB2-222ENST00000584908 C7orf34Q96L11 122 aa14.28□□□□□ -0.12
ERBB2-222ENST00000584908 LRR1Q96L50 414 aa14.28□□□□□ -0.12
ERBB2-222ENST00000584908 C20orf141Q9NUB4 165 aa14.28□□□□□ -0.12
ERBB2-222ENST00000584908 SLC25A15Q9Y619 301 aa14.28□□□□□ -0.12
ERBB2-222ENST00000584908 ENPP4Q9Y6X5 453 aa14.28□□□□□ -0.12
ERBB2-222ENST00000584908 ITPR3Q14573 2671 aa14.27□□□□□ -0.12
ERBB2-222ENST00000584908 B2RBV5 119 aa14.27□□□□□ -0.12
ERBB2-222ENST00000584908 ZNF587BE7ETH6 402 aa14.27□□□□□ -0.12
ERBB2-222ENST00000584908 KPNA4O00629 521 aaPredicted RBP14.27□□□□□ -0.12
ERBB2-222ENST00000584908 SLC43A1O75387 559 aa14.27□□□□□ -0.12
ERBB2-222ENST00000584908 GMNNO75496 209 aa14.27□□□□□ -0.12
ERBB2-222ENST00000584908 UPK3AO75631 287 aa14.27□□□□□ -0.12
ERBB2-222ENST00000584908 SEMG1P04279 462 aa14.27□□□□□ -0.12
ERBB2-222ENST00000584908 ADORA3P0DMS8 318 aa14.27□□□□□ -0.12
ERBB2-222ENST00000584908 FUT4P22083 530 aa14.27□□□□□ -0.12
ERBB2-222ENST00000584908 MXRA7P84157 204 aa14.27□□□□□ -0.12
ERBB2-222ENST00000584908 POU3F1Q03052 451 aaPredicted RBP14.27□□□□□ -0.12
ERBB2-222ENST00000584908 TESK1Q15569 626 aa14.27□□□□□ -0.12
ERBB2-222ENST00000584908 STK11Q15831 433 aa14.27□□□□□ -0.12
ERBB2-222ENST00000584908 LINGO2Q7L985 606 aa14.27□□□□□ -0.12
ERBB2-222ENST00000584908 LRRC17Q8N6Y2 441 aa14.27□□□□□ -0.12
ERBB2-222ENST00000584908 PIK3C3Q8NEB9 887 aa14.27□□□□□ -0.12
ERBB2-222ENST00000584908 PFN4Q8NHR9 129 aa14.27□□□□□ -0.12
ERBB2-222ENST00000584908 BCAS4Q8TDM0 211 aa14.27□□□□□ -0.12
ERBB2-222ENST00000584908 FNDC11Q9BVV2 318 aa14.27□□□□□ -0.12
ERBB2-222ENST00000584908 ANKRD19PQ9H560 264 aa14.27□□□□□ -0.12
ERBB2-222ENST00000584908 MED31Q9Y3C7 131 aa14.27□□□□□ -0.12
ERBB2-222ENST00000584908 PLCE1Q9P212 2302 aa14.27□□□□□ -0.13
ERBB2-222ENST00000584908 DSCAMO60469 2012 aa14.26□□□□□ -0.13
ERBB2-222ENST00000584908 J3KTA2 159 aa14.26□□□□□ -0.13
ERBB2-222ENST00000584908 ARPC2O15144 300 aa14.26□□□□□ -0.13
ERBB2-222ENST00000584908 OR7A10O76100 309 aa14.26□□□□□ -0.13
ERBB2-222ENST00000584908 ATE1O95260 518 aa14.26□□□□□ -0.13
ERBB2-222ENST00000584908 RAF1P04049 648 aa14.26□□□□□ -0.13
ERBB2-222ENST00000584908 TCN1P20061 433 aaPredicted RBP14.26□□□□□ -0.13
ERBB2-222ENST00000584908 SH3BGRP55822 239 aaPredicted RBP14.26□□□□□ -0.13
ERBB2-222ENST00000584908 LGALS3BPQ08380 585 aa14.26□□□□□ -0.13
ERBB2-222ENST00000584908 TRAM2Q15035 370 aa14.26□□□□□ -0.13
ERBB2-222ENST00000584908 IQCCQ4KMZ1 466 aa14.26□□□□□ -0.13
ERBB2-222ENST00000584908 ADAM5Q6NVV9 412 aa14.26□□□□□ -0.13
ERBB2-222ENST00000584908 C20orf196Q8IYI0 205 aa14.26□□□□□ -0.13
ERBB2-222ENST00000584908 RNF113BQ8IZP6 322 aaKnown RBP14.26□□□□□ -0.13
ERBB2-222ENST00000584908 FAM86B1Q8N7N1 296 aa14.26□□□□□ -0.13
ERBB2-222ENST00000584908 WDR31Q8NA23 367 aa14.26□□□□□ -0.13
ERBB2-222ENST00000584908 MAGEE2Q8TD90 523 aaPredicted RBP14.26□□□□□ -0.13
ERBB2-222ENST00000584908 MBD6Q96DN6 1003 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms