RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 SCARB2Q14108 478 aa17.77■□□□□ 0.44
TOP3A-219ENST00000584887 SWI5Q1ZZU3 235 aa17.77■□□□□ 0.44
TOP3A-219ENST00000584887 CEACAM16Q2WEN9 425 aa17.77■□□□□ 0.44
TOP3A-219ENST00000584887 GLIPR1L2Q4G1C9 344 aa17.77■□□□□ 0.44
TOP3A-219ENST00000584887 CYB5R2Q6BCY4 276 aa17.77■□□□□ 0.44
TOP3A-219ENST00000584887 C5orf46Q6UWT4 87 aa17.77■□□□□ 0.44
TOP3A-219ENST00000584887 H1FNTQ75WM6 255 aaPredicted RBP17.77■□□□□ 0.44
TOP3A-219ENST00000584887 C10orf53Q8N6V4 93 aa17.77■□□□□ 0.44
TOP3A-219ENST00000584887 MAGEE2Q8TD90 523 aaPredicted RBP17.77■□□□□ 0.44
TOP3A-219ENST00000584887 DYDC1Q8WWB3 177 aa17.77■□□□□ 0.44
TOP3A-219ENST00000584887 PROX1Q92786 737 aa17.77■□□□□ 0.44
TOP3A-219ENST00000584887 ZNF317Q96PQ6 595 aaPredicted RBP17.77■□□□□ 0.44
TOP3A-219ENST00000584887 CCDC28BQ9BUN5 200 aa17.77■□□□□ 0.44
TOP3A-219ENST00000584887 REPIN1Q9BWE0 567 aaKnown RBP17.77■□□□□ 0.44
TOP3A-219ENST00000584887 RSPO3Q9BXY4 272 aaPredicted RBP17.77■□□□□ 0.44
TOP3A-219ENST00000584887 C12orf10Q9HB07 376 aa17.77■□□□□ 0.44
TOP3A-219ENST00000584887 GPR35Q9HC97 309 aa17.77■□□□□ 0.44
TOP3A-219ENST00000584887 KLHL14Q9P2G3 628 aa17.77■□□□□ 0.44
TOP3A-219ENST00000584887 STAB1Q9NY15 2570 aa17.77■□□□□ 0.43
TOP3A-219ENST00000584887 ZNF432O94892 652 aa17.76■□□□□ 0.43
TOP3A-219ENST00000584887 CELA3BP08861 270 aa17.76■□□□□ 0.43
TOP3A-219ENST00000584887 OR4A8P0C604 315 aa17.76■□□□□ 0.43
TOP3A-219ENST00000584887 PAX7P23759 505 aa17.76■□□□□ 0.43
TOP3A-219ENST00000584887 SLC6A2P23975 617 aa17.76■□□□□ 0.43
TOP3A-219ENST00000584887 CALCRP30988 508 aa17.76■□□□□ 0.43
TOP3A-219ENST00000584887 UEVLDQ8IX04 471 aa17.76■□□□□ 0.43
TOP3A-219ENST00000584887 LSMEM1Q8N8F7 131 aa17.76■□□□□ 0.43
TOP3A-219ENST00000584887 SPATA3Q8NHX4 192 aa17.76■□□□□ 0.43
TOP3A-219ENST00000584887 OR2M2Q96R28 347 aa17.76■□□□□ 0.43
TOP3A-219ENST00000584887 ZNF607Q96SK3 696 aa17.76■□□□□ 0.43
TOP3A-219ENST00000584887 PIMREGQ9BSJ6 248 aa17.76■□□□□ 0.43
TOP3A-219ENST00000584887 IKZF5Q9H5V7 419 aa17.76■□□□□ 0.43
TOP3A-219ENST00000584887 TMEM27Q9HBJ8 222 aa17.76■□□□□ 0.43
TOP3A-219ENST00000584887 CRLF2Q9HC73 371 aa17.76■□□□□ 0.43
TOP3A-219ENST00000584887 TESQ9UGI8 421 aaKnown RBP17.76■□□□□ 0.43
TOP3A-219ENST00000584887 PRORSD1PA6NEY8 169 aa17.75■□□□□ 0.43
TOP3A-219ENST00000584887 EVPLLA8MZ36 301 aa17.75■□□□□ 0.43
TOP3A-219ENST00000584887 M0R3G1 203 aa17.75■□□□□ 0.43
TOP3A-219ENST00000584887 IGHV4-31P0DP07 118 aa17.75■□□□□ 0.43
TOP3A-219ENST00000584887 LSM11P83369 360 aaKnown RBP eCLIP17.75■□□□□ 0.43
TOP3A-219ENST00000584887 ADIPOQQ15848 244 aa17.75■□□□□ 0.43
TOP3A-219ENST00000584887 ULK3Q6PHR2 472 aa17.75■□□□□ 0.43
TOP3A-219ENST00000584887 MYPOPQ86VE0 399 aaPredicted RBP17.75■□□□□ 0.43
TOP3A-219ENST00000584887 PIK3C3Q8NEB9 887 aa17.75■□□□□ 0.43
TOP3A-219ENST00000584887 OR4F15Q8NGB8 312 aa17.75■□□□□ 0.43
TOP3A-219ENST00000584887 ZNF837Q96EG3 531 aaPredicted RBP17.75■□□□□ 0.43
TOP3A-219ENST00000584887 SLC47A1Q96FL8 570 aa17.75■□□□□ 0.43
TOP3A-219ENST00000584887 ASPNQ9BXN1 380 aa17.75■□□□□ 0.43
TOP3A-219ENST00000584887 BEX2Q9BXY8 128 aa17.75■□□□□ 0.43
TOP3A-219ENST00000584887 MOV10Q9HCE1 1003 aaKnown RBP17.75■□□□□ 0.43
TOP3A-219ENST00000584887 CRNNQ9UBG3 495 aaPredicted RBP17.75■□□□□ 0.43
TOP3A-219ENST00000584887 CDC42EP3Q9UKI2 254 aa17.75■□□□□ 0.43
TOP3A-219ENST00000584887 CORO2BQ9UQ03 480 aa17.75■□□□□ 0.43
TOP3A-219ENST00000584887 YLPM1P49750 1951 aaKnown RBP17.74■□□□□ 0.43
TOP3A-219ENST00000584887 B9A039 149 aa17.74■□□□□ 0.43
TOP3A-219ENST00000584887 RPL36A-HNRNPH2H7BZ11 118 aa17.74■□□□□ 0.43
TOP3A-219ENST00000584887 TRAF3IP2O43734 574 aaPredicted RBP17.74■□□□□ 0.43
TOP3A-219ENST00000584887 SERPINB7O75635 380 aa17.74■□□□□ 0.43
TOP3A-219ENST00000584887 SERPINI2O75830 405 aa17.74■□□□□ 0.43
TOP3A-219ENST00000584887 IGLV1-44P01699 117 aa17.74■□□□□ 0.43
TOP3A-219ENST00000584887 HOXB1P14653 301 aaPredicted RBP17.74■□□□□ 0.43
TOP3A-219ENST00000584887 SQLEQ14534 574 aa17.74■□□□□ 0.43
TOP3A-219ENST00000584887 OR1Q1Q15612 314 aa17.74■□□□□ 0.43
TOP3A-219ENST00000584887 IQCCQ4KMZ1 466 aa17.74■□□□□ 0.43
TOP3A-219ENST00000584887 NET1Q7Z628 596 aaPredicted RBP17.74■□□□□ 0.43
TOP3A-219ENST00000584887 ARMC8Q8IUR7 673 aa17.74■□□□□ 0.43
TOP3A-219ENST00000584887 EPYCQ99645 322 aa17.74■□□□□ 0.43
TOP3A-219ENST00000584887 ANGPT4Q9Y264 503 aa17.74■□□□□ 0.43
TOP3A-219ENST00000584887 FBN1P35555 2871 aaKnown RBP17.73■□□□□ 0.43
TOP3A-219ENST00000584887 MALRD1Q5VYJ5 2156 aa17.73■□□□□ 0.43
TOP3A-219ENST00000584887 TRBV5-3A0A0A0MS03 114 aa17.73■□□□□ 0.43
TOP3A-219ENST00000584887 PDE5AO76074 875 aa17.73■□□□□ 0.43
TOP3A-219ENST00000584887 HPRP00739 348 aa17.73■□□□□ 0.43
TOP3A-219ENST00000584887 FAM157CP0CG43 387 aa17.73■□□□□ 0.43
TOP3A-219ENST00000584887 HLA-DOBP13765 273 aa17.73■□□□□ 0.43
TOP3A-219ENST00000584887 CBR1P16152 277 aa17.73■□□□□ 0.43
TOP3A-219ENST00000584887 POU3F1Q03052 451 aaPredicted RBP17.73■□□□□ 0.43
TOP3A-219ENST00000584887 HGFACQ04756 655 aa17.73■□□□□ 0.43
TOP3A-219ENST00000584887 PMS2P3Q13401 168 aa17.73■□□□□ 0.43
TOP3A-219ENST00000584887 MFSD13AQ14CX5 517 aa17.73■□□□□ 0.43
TOP3A-219ENST00000584887 C3orf36Q3SXR2 165 aa17.73■□□□□ 0.43
TOP3A-219ENST00000584887 FAM91A1Q658Y4 838 aa17.73■□□□□ 0.43
TOP3A-219ENST00000584887 MDP1Q86V88 176 aa17.73■□□□□ 0.43
TOP3A-219ENST00000584887 RANBP3LQ86VV4 465 aaPredicted RBP17.73■□□□□ 0.43
TOP3A-219ENST00000584887 TMEM123Q8N131 208 aa17.73■□□□□ 0.43
TOP3A-219ENST00000584887 HIPK4Q8NE63 616 aa17.73■□□□□ 0.43
TOP3A-219ENST00000584887 ANKK1Q8NFD2 765 aa17.73■□□□□ 0.43
TOP3A-219ENST00000584887 THOC1Q96FV9 657 aaKnown RBP17.73■□□□□ 0.43
TOP3A-219ENST00000584887 FOXN4Q96NZ1 517 aa17.73■□□□□ 0.43
TOP3A-219ENST00000584887 CPPED1Q9BRF8 314 aaPredicted RBP17.73■□□□□ 0.43
TOP3A-219ENST00000584887 EMC6Q9BV81 110 aa17.73■□□□□ 0.43
TOP3A-219ENST00000584887 TMEM38AQ9H6F2 299 aa17.73■□□□□ 0.43
TOP3A-219ENST00000584887 CHODLQ9H9P2 273 aa17.73■□□□□ 0.43
TOP3A-219ENST00000584887 SLC52A3Q9NQ40 469 aa17.73■□□□□ 0.43
TOP3A-219ENST00000584887 A0A087WUJ7 227 aa17.72■□□□□ 0.43
TOP3A-219ENST00000584887 A0A0B4J2E0 115 aa17.72■□□□□ 0.43
TOP3A-219ENST00000584887 A0A1B0GX12 115 aa17.72■□□□□ 0.43
TOP3A-219ENST00000584887 ZNF503-AS2A6NEH8 195 aa17.72■□□□□ 0.43
TOP3A-219ENST00000584887 hCG_2039718K7EN88 272 aa17.72■□□□□ 0.43
TOP3A-219ENST00000584887 FZD7O75084 574 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms