RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 SLC22A25Q6T423 547 aa17.9■□□□□ 0.46
SS18-224ENST00000584083 LINC00114Q6XXX2 140 aa17.9■□□□□ 0.46
SS18-224ENST00000584083 SPATA21Q7Z572 469 aa17.9■□□□□ 0.46
SS18-224ENST00000584083 YTHDF3Q7Z739 585 aaKnown RBP17.9■□□□□ 0.46
SS18-224ENST00000584083 CARM1Q86X55 608 aa17.9■□□□□ 0.46
SS18-224ENST00000584083 DEPDC4Q8N2C3 294 aa17.9■□□□□ 0.46
SS18-224ENST00000584083 GPR137CQ8N3F9 429 aa17.9■□□□□ 0.46
SS18-224ENST00000584083 SLC41A3Q96GZ6 507 aa17.9■□□□□ 0.46
SS18-224ENST00000584083 FAM107BQ9H098 131 aa17.9■□□□□ 0.46
SS18-224ENST00000584083 MRPL39Q9NYK5 338 aaKnown RBP17.9■□□□□ 0.46
SS18-224ENST00000584083 ALPK2Q86TB3 2170 aa17.89■□□□□ 0.45
SS18-224ENST00000584083 TRAF3IP2O43734 574 aaPredicted RBP17.89■□□□□ 0.45
SS18-224ENST00000584083 ZNF432O94892 652 aa17.89■□□□□ 0.45
SS18-224ENST00000584083 HPRP00739 348 aa17.89■□□□□ 0.45
SS18-224ENST00000584083 MT-ATP6P00846 226 aa17.89■□□□□ 0.45
SS18-224ENST00000584083 TNFRSF1BP20333 461 aa17.89■□□□□ 0.45
SS18-224ENST00000584083 SEC24CP53992 1094 aa17.89■□□□□ 0.45
SS18-224ENST00000584083 SLC25A3Q00325 362 aa17.89■□□□□ 0.45
SS18-224ENST00000584083 LRRC23Q53EV4 343 aaPredicted RBP17.89■□□□□ 0.45
SS18-224ENST00000584083 C1QTNF12Q5T7M4 302 aa17.89■□□□□ 0.45
SS18-224ENST00000584083 PRSS57Q6UWY2 283 aa17.89■□□□□ 0.45
SS18-224ENST00000584083 WDR88Q6ZMY6 472 aa17.89■□□□□ 0.45
SS18-224ENST00000584083 LINGO2Q7L985 606 aa17.89■□□□□ 0.45
SS18-224ENST00000584083 ARPINQ7Z6K5 226 aa17.89■□□□□ 0.45
SS18-224ENST00000584083 TSPYL5Q86VY4 417 aaPredicted RBP17.89■□□□□ 0.45
SS18-224ENST00000584083 MICU2Q8IYU8 434 aa17.89■□□□□ 0.45
SS18-224ENST00000584083 OR1K1Q8NGR3 316 aa17.89■□□□□ 0.45
SS18-224ENST00000584083 GTPBP3Q969Y2 492 aaKnown RBP17.89■□□□□ 0.45
SS18-224ENST00000584083 PCDHAC1Q9H158 963 aa17.89■□□□□ 0.45
SS18-224ENST00000584083 ZNF701Q9NV72 531 aaPredicted RBP17.89■□□□□ 0.45
SS18-224ENST00000584083 AP3M1Q9Y2T2 418 aa17.89■□□□□ 0.45
SS18-224ENST00000584083 ELOVL7A1L3X0 281 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 KPNA4O00629 521 aaPredicted RBP17.88■□□□□ 0.45
SS18-224ENST00000584083 OR6A2O95222 327 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 LYPD3O95274 346 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 THY1P04216 161 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 SOD3P08294 240 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 DANCRP0C864 163 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 HLA-DOBP13765 273 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 FOSL1P15407 271 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 AHCYP23526 432 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 KDELR2P33947 212 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 ATP5J2P56134 94 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 TAS2R41P59536 307 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 UBE2NP61088 152 aaKnown RBP17.88■□□□□ 0.45
SS18-224ENST00000584083 POU3F1Q03052 451 aaPredicted RBP17.88■□□□□ 0.45
SS18-224ENST00000584083 PUDPQ08623 228 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 SPOCK1Q08629 439 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 TBRG1Q3YBR2 411 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 CYBRD1Q53TN4 286 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 CARD17Q5XLA6 110 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 DEF8Q6ZN54 512 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 PIK3C3Q8NEB9 887 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 TPD52L3Q96J77 140 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 MPP4Q96JB8 637 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 Q96MF0 132 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 OR2M2Q96R28 347 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 EFCAB1Q9HAE3 211 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 DLL4Q9NR61 685 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 FAIMQ9NVQ4 179 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 CMTM6Q9NX76 183 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 NOX1Q9Y5S8 564 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 PLCE1Q9P212 2302 aa17.88■□□□□ 0.45
SS18-224ENST00000584083 A0A096LPE4 126 aa17.87■□□□□ 0.45
SS18-224ENST00000584083 A0A1W2PPZ6 126 aa17.87■□□□□ 0.45
SS18-224ENST00000584083 PLPP3O14495 311 aa17.87■□□□□ 0.45
SS18-224ENST00000584083 SHOX2O60902 331 aaPredicted RBP17.87■□□□□ 0.45
SS18-224ENST00000584083 SERPINI2O75830 405 aa17.87■□□□□ 0.45
SS18-224ENST00000584083 CH25HO95992 272 aa17.87■□□□□ 0.45
SS18-224ENST00000584083 OR1E2P47887 323 aa17.87■□□□□ 0.45
SS18-224ENST00000584083 SH3BGRP55822 239 aaPredicted RBP17.87■□□□□ 0.45
SS18-224ENST00000584083 PGGHGQ32M88 737 aa17.87■□□□□ 0.45
SS18-224ENST00000584083 ANKRD16Q6P6B7 361 aa17.87■□□□□ 0.45
SS18-224ENST00000584083 TREML1Q86YW5 311 aa17.87■□□□□ 0.45
SS18-224ENST00000584083 SLC15A3Q8IY34 581 aa17.87■□□□□ 0.45
SS18-224ENST00000584083 OR5J2Q8NH18 312 aa17.87■□□□□ 0.45
SS18-224ENST00000584083 BCL2L2Q92843 193 aaPredicted RBP17.87■□□□□ 0.45
SS18-224ENST00000584083 EMC6Q9BV81 110 aa17.87■□□□□ 0.45
SS18-224ENST00000584083 NSRP1Q9H0G5 558 aaKnown RBP17.87■□□□□ 0.45
SS18-224ENST00000584083 ALG2Q9H553 416 aa17.87■□□□□ 0.45
SS18-224ENST00000584083 GPR35Q9HC97 309 aa17.87■□□□□ 0.45
SS18-224ENST00000584083 OBP2BQ9NPH6 170 aa17.87■□□□□ 0.45
SS18-224ENST00000584083 MTORP42345 2549 aa17.87■□□□□ 0.45
SS18-224ENST00000584083 ZNF726A6NNF4 738 aa17.86■□□□□ 0.45
SS18-224ENST00000584083 C11orf98E9PRG8 122 aa17.86■□□□□ 0.45
SS18-224ENST00000584083 HIST1H2ABP04908 130 aa17.86■□□□□ 0.45
SS18-224ENST00000584083 ADORA3P0DMS8 318 aa17.86■□□□□ 0.45
SS18-224ENST00000584083 PAX1P15863 534 aa17.86■□□□□ 0.45
SS18-224ENST00000584083 ARF1P84077 181 aaKnown RBP17.86■□□□□ 0.45
SS18-224ENST00000584083 LIPEQ05469 1076 aa17.86■□□□□ 0.45
SS18-224ENST00000584083 ZNF74Q16587 644 aa17.86■□□□□ 0.45
SS18-224ENST00000584083 HIST3H2AQ7L7L0 130 aa17.86■□□□□ 0.45
SS18-224ENST00000584083 PXKQ7Z7A4 578 aa17.86■□□□□ 0.45
SS18-224ENST00000584083 CPLX4Q7Z7G2 160 aa17.86■□□□□ 0.45
SS18-224ENST00000584083 TMEM123Q8N131 208 aa17.86■□□□□ 0.45
SS18-224ENST00000584083 HIST1H2ACQ93077 130 aa17.86■□□□□ 0.45
SS18-224ENST00000584083 TRMT61AQ96FX7 289 aaKnown RBP17.86■□□□□ 0.45
SS18-224ENST00000584083 BOD1Q96IK1 185 aa17.86■□□□□ 0.45
SS18-224ENST00000584083 TXNDC15Q96J42 360 aa17.86■□□□□ 0.45
SS18-224ENST00000584083 C18orf12Q96KH6 178 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms