RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 CHST2Q9Y4C5 530 aa6.8□□□□□ -1.32
PPP4R1-225ENST00000583438 VWFP04275 2813 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 CIB4A0PJX0 185 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 GJE1A6NN92 205 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 GTPBP1O00178 669 aaKnown RBP6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 ANKRD28O15084 1053 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 SKAP2O75563 359 aaPredicted RBP6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 PMS2P2O95744 297 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 CSTAP01040 98 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 TGFAP01135 160 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 CHRM4P08173 479 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 CECR9P0C854 216 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 G6PDP11413 515 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 APEHP13798 732 aaKnown RBP6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 CPA3P15088 417 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 ZNF23P17027 643 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 ATP6V1C1P21283 382 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 APOBEC3AP31941 199 aaPredicted RBP6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 RYKP34925 604 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 MSX2P35548 267 aaPredicted RBP6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 RBMXP38159 391 aaKnown RBP6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 DSCR9P59020 149 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 ARHGAP11BQ3KRB8 267 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 OR4F3Q6IEY1 312 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 TNFAIP8L2Q6P589 184 aaPredicted RBP6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 CASP12Q6UXS9 341 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 C6orf120Q7Z4R8 191 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 ANKRD46Q86W74 232 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 CDK20Q8IZL9 346 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 TMEM99Q8N816 258 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 TOR1AIP2Q8NFQ8 470 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 SFXN5Q8TD22 340 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 ADAMTS15Q8TE58 950 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 ST8SIA1Q92185 356 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 MTERF3Q96E29 417 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 RADILQ96JH8 1075 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 C20orf27Q9GZN8 174 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 OR51I1Q9H343 314 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 FANCFQ9NPI8 374 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 SLC6A13Q9NSD5 602 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 CHRNA9Q9UGM1 479 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 ZDHHC2Q9UIJ5 367 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 OSGIN1Q9UJX0 560 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 KCNS2Q9ULS6 477 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 MGAT4BQ9UQ53 548 aa6.79□□□□□ -1.32
PPP4R1-225ENST00000583438 RNF103-CHMP3A0A140T963 221 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 SMIM23A6NLE4 172 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 FAM157AC9JC47 383 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 CRCPO75575 148 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 LYPLA1O75608 230 aaPredicted RBP6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 UPK3AO75631 287 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 AKR7A3O95154 331 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 STAMBPO95630 424 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 LGI1O95970 557 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 IGLV1-44P01699 117 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 FGF4P08620 206 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 TACSTD2P09758 323 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 OR12D1P0DN82 309 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 TFPIP10646 304 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 CDH2P19022 906 aaPredicted RBP6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 PGCP20142 388 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 RPS4Y1P22090 263 aaKnown RBP6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 GIFP27352 417 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 SOAT1P35610 550 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 SELENOPP49908 381 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 PDLIM4P50479 330 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 OR2B6P58173 313 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 NAAAQ02083 359 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 CKAP4Q07065 602 aaKnown RBP6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 BNIP2Q12982 314 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 CCNIQ14094 377 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 ICAM4Q14773 271 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 CARTPTQ16568 116 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 TBRG1Q3YBR2 411 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 PHYHD1Q5SRE7 291 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 IL23RQ5VWK5 629 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 RINLQ6ZS11 566 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 TRMT10CQ7L0Y3 403 aaKnown RBP6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 COMTD1Q86VU5 262 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 DDIASQ8IXT1 998 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 ANKFN1Q8N957 763 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 OR56A1Q8NGH5 318 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 OR1K1Q8NGR3 316 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 Q8TCH9 128 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 BCL2L2Q92843 193 aaPredicted RBP6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 BOD1Q96IK1 185 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 TEX37Q96LM6 180 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 ALKBH3Q96Q83 286 aaPredicted RBP6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 SNX18Q96RF0 628 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 DUSP26Q9BV47 211 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 SLC38A1Q9H2H9 487 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 PLK3Q9H4B4 646 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 CA10Q9NS85 328 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 RLIMQ9NVW2 624 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 MYEF2Q9P2K5 600 aaKnown RBP6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 CRNNQ9UBG3 495 aaPredicted RBP6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 DCDC2Q9UHG0 476 aa6.78□□□□□ -1.32
PPP4R1-225ENST00000583438 TMED7-TICAM2A0A0A6YYA0 188 aa6.77□□□□□ -1.33
PPP4R1-225ENST00000583438 CCDC151A5D8V7 595 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms