RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	TGFA	P01135	160 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	GRPR	P30550	384 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	ZSWIM7	Q19AV6	140 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	GLIPR1L2	Q4G1C9	344 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	PHYHD1	Q5SRE7	291 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	C1QTNF12	Q5T7M4	302 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	KRT80	Q6KB66	452 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	MSANTD1	Q6ZTZ1	278 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	MDP1	Q86V88	176 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	CDK20	Q8IZL9	346 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	C10orf111	Q8N326	155 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	OR4F15	Q8NGB8	312 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	MAGEE2	Q8TD90	523 aa	Predicted RBP	10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	OXGR1	Q96P68	337 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	OR2M2	Q96R28	347 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	EMC6	Q9BV81	110 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	PLK3	Q9H4B4	646 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	THUMPD1	Q9NXG2	353 aa	Known RBP	10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	SLC25A37	Q9NYZ2	338 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	SLAMF8	Q9P0V8	285 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	USH1C	Q9Y6N9	552 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	IGHV2OR16-5	A0A0B4J2B6	119 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	LYNX1	G3V0Z9	82 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	RPL36A-HNRNPH2	H7BZ11	118 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	TPST1	O60507	370 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	SERPINI2	O75830	405 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	STAMBP	O95630	424 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	HPR	P00739	348 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	IGKV3-15	P01624	115 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	LYNX1	P0DP58	116 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	CD79A	P11912	226 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	HLA-DOB	P13765	273 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	DAO	P14920	347 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	NQO1	P15559	274 aa	Known RBP	10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	CBR1	P16152	277 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	HOXB9	P17482	250 aa	Predicted RBP	10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	NPR2	P20594	1047 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	AQP1	P29972	269 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	IL2RG	P31785	369 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	PPOX	P50336	477 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	AQP5	P55064	265 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	SH3BGR	P55822	239 aa	Predicted RBP	10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	FADD	Q13158	208 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	SNTB2	Q13425	540 aa	Known RBP	10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	EFNB3	Q15768	340 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	ALG10B	Q5I7T1	473 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	GCNT6	Q5T4J0	391 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	FAM69A	Q5T7M9	428 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	H1FNT	Q75WM6	255 aa	Predicted RBP	10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	CROCCP2	Q86T23	111 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	WDFY1	Q8IWB7	410 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	MSRB3	Q8IXL7	192 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	GOLGA6L1	Q8N7Z2	621 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	NUP37	Q8NFH4	326 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	SLC38A4	Q969I6	547 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	C19orf24	Q9BVV8	132 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	RAB1B	Q9H0U4	201 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	TPK1	Q9H3S4	243 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	RAD21L1	Q9H4I0	556 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	BCL2L10	Q9HD36	194 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	DYNLRB1	Q9NP97	96 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	KLHL14	Q9P2G3	628 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	RCE1	Q9Y256	329 aa		10.07	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	TRAV36DV7	A0A075B6V5	113 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	TMEM129	A0AVI4	362 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	LRRN3	E7EW58	273 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	TRAF3IP2	O43734	574 aa	Predicted RBP	10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	PDE5A	O76074	875 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	HLA-H	P01893	362 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	ADRA2A	P08913	450 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	ARAF	P10398	606 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	ZNF23	P17027	643 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	PRKAR1B	P31321	381 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	STX1B	P61266	288 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	NCALD	P61601	193 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	PIGF	Q07326	219 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	DAG1	Q14118	895 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	ADRM1	Q16186	407 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	CR1L	Q2VPA4	569 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	C3orf36	Q3SXR2	165 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	PAGE3	Q5JUK9	113 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	C6orf89	Q6UWU4	347 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	UEVLD	Q8IX04	471 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	TMEM123	Q8N131	208 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	C10orf53	Q8N6V4	93 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	PIK3C3	Q8NEB9	887 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	CKAP2	Q8WWK9	683 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	MS4A3	Q96HJ5	214 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	TXNDC15	Q96J42	360 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	ZNF317	Q96PQ6	595 aa	Predicted RBP	10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	SNX18	Q96RF0	628 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	DOK1	Q99704	481 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	WFDC6	Q9BQY6	131 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	NOX3	Q9HBY0	568 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	MYOZ1	Q9NP98	299 aa	Predicted RBP	10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	MED29	Q9NX70	200 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	CCDC167	Q9P0B6	97 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	VAPA	Q9P0L0	249 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	PRDM4	Q9UKN5	801 aa		10.06	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	10.05	□□□□□ -0.8	3e-9	■■□□□ 14.2

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms