RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 TBC1D23Q9NUY8 699 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 PAQR5Q9NXK6 330 aaPredicted RBP12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 CNOT2Q9NZN8 540 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 TNFRSF10DQ9UBN6 386 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 CHRNA9Q9UGM1 479 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 RNF6Q9Y252 685 aa12.11□□□□□ -0.47
CSNK1D-220ENST00000581737 DIDO1Q9BTC0 2240 aaKnown RBP12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 E9PLN8 166 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 SEC14L5O43304 696 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 RCBTB2O95199 551 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 HMGN1P05114 100 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 PNMTP11086 282 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 CXCR1P25024 350 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 TACR3P29371 465 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 STARP49675 285 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 CLK1P49759 484 aaKnown RBP12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 SNRPGP62308 76 aaKnown RBP12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 FOXD4Q12950 439 aaPredicted RBP12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 TESK1Q15569 626 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 C1orf185Q5T7R7 199 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 SLC27A4Q6P1M0 643 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 PRSS48Q7RTY5 328 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 COMTD1Q86VU5 262 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 DOLPP1Q86YN1 238 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 UBQLNLQ8IYU4 475 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 ALDH16A1Q8IZ83 802 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 ZNF295-AS1Q8N0V1 137 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 ZPLD1Q8TCW7 415 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 RORBQ92753 470 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 RELTQ969Z4 430 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 VKORC1Q9BQB6 163 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 SLC19A3Q9BZV2 496 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 ADAM19Q9H013 955 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 TIGARQ9NQ88 270 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 ALKBH4Q9NXW9 302 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 RSL24D1Q9UHA3 163 aaKnown RBP12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 TINAGQ9UJW2 476 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 BAIAP2Q9UQB8 552 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 PCDHGB1Q9Y5G3 927 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 CDH10Q9Y6N8 788 aa12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 PHF3Q92576 2039 aaKnown RBP12.1□□□□□ -0.47
CSNK1D-220ENST00000581737 TMED7-TICAM2A0A0A6YYA0 188 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 A0A0B4J2E0 115 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 A0A1B0GWA3 101 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 A0A1B0GX12 115 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 UNC119BA6NIH7 251 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 EIF1AYO14602 144 aaKnown RBP12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 ZNF208O43345 1280 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 FMO3P31513 532 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 SFTPDP35247 375 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 CDH15P55291 814 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 SLC35A2P78381 396 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 HOXC5Q00444 222 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 SRYQ05066 204 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 NEDD8Q15843 81 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 ACSF3Q4G176 576 aaPredicted RBP12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 SYT14P1Q58G82 188 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 ALG10BQ5I7T1 473 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 EMC4Q5J8M3 183 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 C12orf73Q69YU5 71 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 TMEM211Q6ICI0 200 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 POMZP3Q6PJE2 187 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 B3GNT6Q6ZMB0 384 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 ZER1Q7Z7L7 766 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 GGNQ86UU5 652 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 NRMQ8IXM6 262 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 STX19Q8N4C7 294 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 OR2V1Q8NHB1 315 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 C3orf49Q96BT1 292 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 DDIT4LQ96D03 193 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 NPAS1Q99742 590 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 COPS4Q9BT78 406 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 RSPO3Q9BXY4 272 aaPredicted RBP12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 POLDIP3Q9BY77 421 aaKnown RBP12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 RACGAP1Q9H0H5 632 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 DUSP21Q9H596 190 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 TMEM185BQ9H7F4 350 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 REV1Q9UBZ9 1251 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 SH3BGRL2Q9UJC5 107 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 OSGIN1Q9UJX0 560 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 TMED7Q9Y3B3 224 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 RPL36Q9Y3U8 105 aaKnown RBP12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 COMMD3-BMI1R4GMX3 469 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 ARHGAP21Q5T5U3 1957 aa12.09□□□□□ -0.47
CSNK1D-220ENST00000581737 MYO7BQ6PIF6 2116 aa12.08□□□□□ -0.47
CSNK1D-220ENST00000581737 MPDZO75970 2070 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 CD8B2A6NJW9 211 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 ELOA3DA6NLF2 546 aaPredicted RBP12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 CLCA1A8K7I4 914 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 PTGES3LE9PB15 166 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 C19orf84I3L1E1 186 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 CCL21O00585 134 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 ZNHIT1O43257 154 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 SOX14O95416 240 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 TFPIP10646 304 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 PIPP12273 146 aaPredicted RBP12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 FCGR2AP12318 317 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 HTR2AP28223 471 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 OMPP47874 163 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 PCYT1AP49585 367 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms