RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.1□□□□□ -0.63
SNORD55-201ENST00000581525 B2RBV5 119 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 LYZL6O75951 148 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 HLA-DOBP13765 273 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 HOXB1P14653 301 aaPredicted RBP11.1□□□□□ -0.63
SNORD55-201ENST00000581525 NCK1P16333 377 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 GTF2E2P29084 291 aaKnown RBP11.1□□□□□ -0.63
SNORD55-201ENST00000581525 NR1H2P55055 460 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 TAS2R41P59536 307 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 PMS2P3Q13401 168 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 TSC22D1Q15714 1073 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 STK11Q15831 433 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 LINGO2Q7L985 606 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 ABHD12BQ7Z5M8 362 aaPredicted RBP11.1□□□□□ -0.63
SNORD55-201ENST00000581525 CDH24Q86UP0 819 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 DEFB107AQ8IZN7 70 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 WDR31Q8NA23 367 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 RBM15BQ8NDT2 890 aaKnown RBP11.1□□□□□ -0.63
SNORD55-201ENST00000581525 PIK3C3Q8NEB9 887 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 BCAS4Q8TDM0 211 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 TMEM255BQ8WV15 326 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 HSH2DQ96JZ2 352 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 DHRS1Q96LJ7 313 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 OR2M2Q96R28 347 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 CXXC4Q9H2H0 198 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 LIME1Q9H400 295 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 NGBQ9NPG2 151 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 NANSQ9NR45 359 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 TAS2R1Q9NYW7 299 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 C6orf203Q9P0P8 240 aaPredicted RBP11.1□□□□□ -0.63
SNORD55-201ENST00000581525 UPB1Q9UBR1 384 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 ST6GALNAC2Q9UJ37 374 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 MAGEL2Q9UJ55 1249 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 SAMD4AQ9UPU9 718 aaKnown RBP11.1□□□□□ -0.63
SNORD55-201ENST00000581525 CREBBPQ92793 2442 aa11.1□□□□□ -0.63
SNORD55-201ENST00000581525 PRR14LQ5THK1 2151 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 A0A1W2PRQ8 180 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 NPIPB13A6NJU9 1138 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 NPIPB4C9JG80 1138 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 J3KTA2 159 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 OR7A10O76100 309 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 CH25HO95992 272 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 IGHV3-9P01782 118 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 RHCEP18577 417 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 FUT1P19526 365 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 CBLP22681 906 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 IFNA8P32881 189 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 CLDN17P56750 224 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 TGFBR3Q03167 851 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 PRKCDQ05655 676 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 FHL1Q13642 323 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 DGCR6Q14129 220 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 PPA1Q15181 289 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 ANKDD1AQ495B1 522 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 WDFY1Q8IWB7 410 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 UEVLDQ8IX04 471 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 C20orf196Q8IYI0 205 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 UBE2J2Q8N2K1 259 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 LRRC17Q8N6Y2 441 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 RNF148Q8N7C7 305 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 FAM156AQ8NDB6 213 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 RNF217Q8TC41 542 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 FAM162AQ96A26 154 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 PYURFQ96I23 114 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 HS3ST6Q96QI5 342 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 SEPHS2Q99611 448 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 FUZQ9BT04 418 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 SLC17A5Q9NRA2 495 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 NDUFAF4Q9P032 175 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 ACTR3BQ9P1U1 418 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 EDARQ9UNE0 448 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 MED31Q9Y3C7 131 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 ALPK2Q86TB3 2170 aa11.09□□□□□ -0.63
SNORD55-201ENST00000581525 A0A087WUU8 490 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 DPRXA6NFQ7 191 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 ENO4A6NNW6 628 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 CENPBD1B2RD01 187 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 SLC43A1O75387 559 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 UPK3AO75631 287 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 ZNF682O95780 498 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 ADORA3P0DMS8 318 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 SH3BGRP55822 239 aaPredicted RBP11.08□□□□□ -0.64
SNORD55-201ENST00000581525 RPS4XP62701 263 aaKnown RBP11.08□□□□□ -0.64
SNORD55-201ENST00000581525 C1DQ13901 141 aaKnown RBP11.08□□□□□ -0.64
SNORD55-201ENST00000581525 TRAM2Q15035 370 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 C3orf36Q3SXR2 165 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 NIPAL3Q6P499 406 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 PAMR1Q6UXH9 720 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 RINLQ6ZS11 566 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 TMPRSS11FQ6ZWK6 438 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 FKBP9P1Q75LS8 142 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 TRPM8Q7Z2W7 1104 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 FAM86B1Q8N7N1 296 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 FAM169BQ8N8A8 192 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 OR6X1Q8NH79 312 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 LILRB1Q8NHL6 650 aaPredicted RBP11.08□□□□□ -0.64
SNORD55-201ENST00000581525 PFN4Q8NHR9 129 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 ACOT11Q8WXI4 607 aaPredicted RBP11.08□□□□□ -0.64
SNORD55-201ENST00000581525 BCL2L2Q92843 193 aaPredicted RBP11.08□□□□□ -0.64
SNORD55-201ENST00000581525 MUCL1Q96DR8 90 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms