RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 APBB3O95704 486 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 TSPAN15O95858 294 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 NID1P14543 1247 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 GLP1RP43220 463 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 CAMLGP49069 296 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 SEC61A1P61619 476 aaKnown RBP12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 Q6ZSR6 202 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 ABI3BPQ7Z7G0 1075 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 CDC6Q99741 560 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 PRRT1Q99946 306 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 SLC22A6Q4U2R8 563 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 FAM78AQ5JUQ0 283 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 ZNF362Q5T0B9 420 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 BCL2L10Q9HD36 194 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 SERTAD3Q9UJW9 196 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 IGLV3-16A0A075B6K0 115 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 FITM1A5D6W6 292 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 CCR2P41597 374 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 MVDP53602 400 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 RPS27AP62979 156 aaKnown RBP12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 UBA52P62987 128 aaKnown RBP12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 TLE3Q04726 772 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 EIF4EBP2Q13542 120 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 ALKBH1Q13686 389 aaKnown RBP12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 BCL2A1Q16548 175 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 ZNF565Q8N9K5 539 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 ZNF649Q9BS31 505 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 RHBDD3Q9Y3P4 386 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 A0A0J9YY10 115 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 AGAP14A8MT82 685 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 FXYD4P59646 89 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 AANATQ16613 207 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 ADAMTSL4Q6UY14 1074 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 NLRC3Q7RTR2 1065 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 SCARB1Q8WTV0 552 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 LRRC46Q96FV0 321 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 TRMT61AQ96FX7 289 aaKnown RBP12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 CYSLTR2Q9NS75 346 aa12.53□□□□□ -0.4
TRAPPC8-207ENST00000580104 OR5K4A6NMS3 321 aa12.52□□□□□ -0.4
TRAPPC8-207ENST00000580104 PLA2G10O15496 165 aa12.52□□□□□ -0.4
TRAPPC8-207ENST00000580104 RAB6AP20340 208 aa12.52□□□□□ -0.4
TRAPPC8-207ENST00000580104 HNRNPA2B1P22626 353 aaKnown RBP12.52□□□□□ -0.4
TRAPPC8-207ENST00000580104 TRHRP34981 398 aaPredicted RBP12.52□□□□□ -0.4
TRAPPC8-207ENST00000580104 DYRK1AQ13627 763 aa12.52□□□□□ -0.4
TRAPPC8-207ENST00000580104 TSC22D1Q15714 1073 aa12.52□□□□□ -0.4
TRAPPC8-207ENST00000580104 MEP1BQ16820 701 aa12.52□□□□□ -0.4
TRAPPC8-207ENST00000580104 GLYATL3Q5SZD4 288 aa12.52□□□□□ -0.4
TRAPPC8-207ENST00000580104 WBP2NLQ6ICG8 309 aa12.52□□□□□ -0.4
TRAPPC8-207ENST00000580104 SLC51BQ86UW2 128 aa12.52□□□□□ -0.4
TRAPPC8-207ENST00000580104 MCATQ8IVS2 390 aaKnown RBP12.52□□□□□ -0.4
TRAPPC8-207ENST00000580104 VSX1Q9NZR4 365 aaPredicted RBP12.52□□□□□ -0.4
TRAPPC8-207ENST00000580104 CGGBP1Q9UFW8 167 aaPredicted RBP12.52□□□□□ -0.4
TRAPPC8-207ENST00000580104 B3GALT1Q9Y5Z6 326 aa12.52□□□□□ -0.4
TRAPPC8-207ENST00000580104 SPAG17Q6Q759 2223 aa12.52□□□□□ -0.4
TRAPPC8-207ENST00000580104 RGS13O14921 159 aa12.52□□□□□ -0.4
TRAPPC8-207ENST00000580104 CHP2O43745 196 aa12.52□□□□□ -0.4
TRAPPC8-207ENST00000580104 FGF9P31371 208 aaPredicted RBP12.52□□□□□ -0.4
TRAPPC8-207ENST00000580104 GJA4P35212 333 aa12.52□□□□□ -0.4
TRAPPC8-207ENST00000580104 SVBPQ8N300 66 aa12.52□□□□□ -0.4
TRAPPC8-207ENST00000580104 SLC5A7Q9GZV3 580 aa12.52□□□□□ -0.4
TRAPPC8-207ENST00000580104 CPNE7Q9UBL6 633 aa12.52□□□□□ -0.4
TRAPPC8-207ENST00000580104 OR8U9P0C7N5 309 aa12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 THEGLP0DJG4 465 aa12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 TUBG1P23258 451 aa12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 CYCSP99999 105 aaKnown RBP12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 CDK5Q00535 292 aa12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 FXNQ16595 210 aa12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 FAM74A1Q5RGS3 127 aa12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 LRRC69Q6ZNQ3 347 aa12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 TRAPPC6BQ86SZ2 158 aa12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 FBXL6Q8N531 539 aa12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 OR4D11Q8NGI4 311 aa12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 FAM3DQ96BQ1 224 aa12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 B3GAT2Q9NPZ5 323 aa12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 TAF1LQ8IZX4 1826 aa12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 TPOP07202 933 aa12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 TACR3P29371 465 aa12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 PCBP3P57721 371 aaKnown RBP12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 YIF1BQ5BJH7 314 aa12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 EOGTQ5NDL2 527 aa12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 RHOUQ7L0Q8 258 aa12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 OR51T1Q8NGJ9 327 aa12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 LMF2Q9BU23 707 aaKnown RBP12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 PTDSS2Q9BVG9 487 aa12.52□□□□□ -0.41
TRAPPC8-207ENST00000580104 SEC16AO15027 2179 aa12.51□□□□□ -0.41
TRAPPC8-207ENST00000580104 SNRNP70P08621 437 aaKnown RBP12.51□□□□□ -0.41
TRAPPC8-207ENST00000580104 EPXP11678 715 aa12.51□□□□□ -0.41
TRAPPC8-207ENST00000580104 ZNF16P17020 682 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC8-207ENST00000580104 HTR2CP28335 458 aa12.51□□□□□ -0.41
TRAPPC8-207ENST00000580104 IFITM2Q01629 132 aa12.51□□□□□ -0.41
TRAPPC8-207ENST00000580104 CCINQ13939 588 aa12.51□□□□□ -0.41
TRAPPC8-207ENST00000580104 RHEBQ15382 184 aa12.51□□□□□ -0.41
TRAPPC8-207ENST00000580104 OR7A5Q15622 319 aa12.51□□□□□ -0.41
TRAPPC8-207ENST00000580104 OR8D4Q8NGM9 314 aa12.51□□□□□ -0.41
TRAPPC8-207ENST00000580104 HIST1H2AAQ96QV6 131 aa12.51□□□□□ -0.41
TRAPPC8-207ENST00000580104 BIN3Q9NQY0 253 aa12.51□□□□□ -0.41
TRAPPC8-207ENST00000580104 ICKQ9UPZ9 632 aa12.51□□□□□ -0.41
TRAPPC8-207ENST00000580104 CCDC88CQ9P219 2028 aa12.51□□□□□ -0.41
TRAPPC8-207ENST00000580104 A0A0D9SG52 128 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms